2kob

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: {{Seed}} 200px <!-- The line below this paragraph, containing "STRUCTURE_2kob", creates the "Structure Box" on the page. You may change the PDB parameter (which se...)
Current revision (09:49, 9 May 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2kob.jpg|left|200px]]
 
-
<!--
+
==Solution NMR structure of CLOLEP_01837 (fragment 61-160) from Clostridium leptum. Northeast Structural Genomics Consortium Target QlR8A==
-
The line below this paragraph, containing "STRUCTURE_2kob", creates the "Structure Box" on the page.
+
<StructureSection load='2kob' size='340' side='right'caption='[[2kob]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2kob]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_leptum_DSM_753 Clostridium leptum DSM 753]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KOB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KOB FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kob FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kob OCA], [https://pdbe.org/2kob PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kob RCSB], [https://www.ebi.ac.uk/pdbsum/2kob PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kob ProSAT]</span></td></tr>
-
{{STRUCTURE_2kob| PDB=2kob | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Solution NMR structure of CLOLEP_01837 (fragment 61-160) from Clostridium leptum. Northeast Structural Genomics Consortium Target QlR8A===
+
[https://www.uniprot.org/uniprot/A7VTE5_9FIRM A7VTE5_9FIRM]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2KOB is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_leptum_dsm_753 Clostridium leptum dsm 753]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KOB OCA].
+
<jmolCheckbox>
-
[[Category: Clostridium leptum dsm 753]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ko/2kob_consurf.spt"</scriptWhenChecked>
-
[[Category: Acton, T B.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Ciccosanti, C.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Everett, J K.]]
+
</jmolCheckbox>
-
[[Category: Jiang, M.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kob ConSurf].
-
[[Category: Kennedy, M A.]]
+
<div style="clear:both"></div>
-
[[Category: Lee, D.]]
+
__TOC__
-
[[Category: Montelione, G T.]]
+
</StructureSection>
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Large Structures]]
-
[[Category: Nair, R.]]
+
[[Category: Acton TB]]
-
[[Category: Ramelot, T A.]]
+
[[Category: Ciccosanti C]]
-
[[Category: Rost, B.]]
+
[[Category: Everett JK]]
-
[[Category: Xiao, R.]]
+
[[Category: Jiang M]]
-
[[Category: Alpha beta]]
+
[[Category: Kennedy MA]]
-
[[Category: Nesg]]
+
[[Category: Lee D]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Montelione GT]]
-
[[Category: Protein structure initiative]]
+
[[Category: Nair R]]
-
[[Category: Psi-2]]
+
[[Category: Ramelot TA]]
-
[[Category: Structural genomic]]
+
[[Category: Rost B]]
-
[[Category: Unknown function]]
+
[[Category: Xiao R]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 30 09:23:15 2009''
+

Current revision

Solution NMR structure of CLOLEP_01837 (fragment 61-160) from Clostridium leptum. Northeast Structural Genomics Consortium Target QlR8A

PDB ID 2kob

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2kob"
Personal tools