This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qnu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:26, 25 June 2021) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2qnu.png|left|200px]]
 
-
<!--
+
==Crystal structure of PA0076 from Pseudomonas aeruginosa PAO1 at 2.05 A resolution==
-
The line below this paragraph, containing "STRUCTURE_2qnu", creates the "Structure Box" on the page.
+
<StructureSection load='2qnu' size='340' side='right'caption='[[2qnu]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2qnu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QNU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QNU FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
-
-->
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLZ:N-METHYL-LYSINE'>MLZ</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_2qnu| PDB=2qnu | SCENE= }}
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PA0076 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qnu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qnu OCA], [https://pdbe.org/2qnu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qnu RCSB], [https://www.ebi.ac.uk/pdbsum/2qnu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qnu ProSAT], [https://www.topsan.org/Proteins/MCSG/2qnu TOPSAN]</span></td></tr>
-
===Crystal structure of PA0076 from Pseudomonas aeruginosa PAO1 at 2.05 A resolution===
+
</table>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2QNU is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QNU OCA].
+
<jmolCheckbox>
-
[[Category: Pseudomonas aeruginosa pao1]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qn/2qnu_consurf.spt"</scriptWhenChecked>
-
[[Category: Chruszcz, M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Cymborowski, M.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Edwards, A M.]]
+
</jmolCheckbox>
-
[[Category: Filippova, E V.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qnu ConSurf].
-
[[Category: Joachimiak, A.]]
+
<div style="clear:both"></div>
-
[[Category: Kagan, O.]]
+
__TOC__
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</StructureSection>
-
[[Category: Minor, W.]]
+
[[Category: Large Structures]]
-
[[Category: Savchenko, A.]]
+
[[Category: Pseae]]
-
[[Category: Skarina, T.]]
+
[[Category: Chruszcz, M]]
 +
[[Category: Cymborowski, M]]
 +
[[Category: Edwards, A M]]
 +
[[Category: Filippova, E V]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Kagan, O]]
 +
[[Category: Structural genomic]]
 +
[[Category: Minor, W]]
 +
[[Category: Savchenko, A]]
 +
[[Category: Skarina, T]]
[[Category: Mcsg]]
[[Category: Mcsg]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
[[Category: Pseudomonas aeruginosa pa01]]
[[Category: Pseudomonas aeruginosa pa01]]
-
[[Category: Psi-2]]
 
-
[[Category: Structural genomic]]
 
[[Category: Uncharacterized protein]]
[[Category: Uncharacterized protein]]
[[Category: Unknown function]]
[[Category: Unknown function]]
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 7 13:31:27 2009''
 

Current revision

Crystal structure of PA0076 from Pseudomonas aeruginosa PAO1 at 2.05 A resolution

PDB ID 2qnu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qnu"
Personal tools