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3g98

From Proteopedia

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{{Seed}}
 
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[[Image:3g98.jpg|left|200px]]
 
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==Crystal Structure of the C-Ala domain from Aquifex aeolicus alanyl-tRNA synthetase==
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The line below this paragraph, containing "STRUCTURE_3g98", creates the "Structure Box" on the page.
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<StructureSection load='3g98' size='340' side='right'caption='[[3g98]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3g98]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G98 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G98 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g98 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g98 OCA], [https://pdbe.org/3g98 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g98 RCSB], [https://www.ebi.ac.uk/pdbsum/3g98 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g98 ProSAT]</span></td></tr>
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{{STRUCTURE_3g98| PDB=3g98 | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SYA_AQUAE SYA_AQUAE] Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity).[HAMAP-Rule:MF_00036]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g9/3g98_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3g98 ConSurf].
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<div style="clear:both"></div>
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===Crystal Structure of the C-Ala domain from Aquifex aeolicus alanyl-tRNA synthetase===
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==See Also==
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*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_19661429}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 19661429 is the PubMed ID number.
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{{ABSTRACT_PUBMED_19661429}}
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==About this Structure==
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3G98 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G98 OCA].
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==Reference==
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<ref group="xtra">PMID:19661429</ref><references group="xtra"/>
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[[Category: Alanine--tRNA ligase]]
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[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
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[[Category: Guo, M.]]
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[[Category: Large Structures]]
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[[Category: Schimmel, P.]]
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[[Category: Guo M]]
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[[Category: Yang, X L.]]
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[[Category: Schimmel P]]
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[[Category: Alpha and beta fold]]
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[[Category: Yang XL]]
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[[Category: Aminoacyl-trna synthetase]]
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[[Category: Atp-binding]]
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[[Category: Cytoplasm]]
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[[Category: Ligase]]
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[[Category: Nucleotide-binding]]
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[[Category: Protein biosynthesis]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 7 13:56:17 2009''
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Current revision

Crystal Structure of the C-Ala domain from Aquifex aeolicus alanyl-tRNA synthetase

PDB ID 3g98

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