2klv

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{{Seed}}
 
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[[Image:2klv.jpg|left|200px]]
 
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==Membrane-bound structure of the Pf1 major coat protein in DHPC micelle==
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The line below this paragraph, containing "STRUCTURE_2klv", creates the "Structure Box" on the page.
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<StructureSection load='2klv' size='340' side='right'caption='[[2klv]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2klv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_virus_Pf1 Pseudomonas virus Pf1]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KLV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KLV FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2klv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2klv OCA], [https://pdbe.org/2klv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2klv RCSB], [https://www.ebi.ac.uk/pdbsum/2klv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2klv ProSAT]</span></td></tr>
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{{STRUCTURE_2klv| PDB=2klv | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CAPSD_BPPF1 CAPSD_BPPF1] Self assembles to form a helical capsid wrapping up the viral genomic DNA. The capsid displays a filamentous structure with a length of 760-1950 nm and a width of 6-8 nm. The virion assembly and budding take place at the host inner membrane (By similarity).
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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At pH &gt; 6 added filamentous bacteriophage fd is compatible with many of the detergents used to solubilize membrane proteins for solution NMR studies of membrane proteins and, therefore, serves as an alignment media. In combination with strained polyacrylamide gel alignment, Dipolar Waves can be used to directly assess the secondary structure and a lambda-map extracts the order tensors for de novo structure calculation of membrane proteins without distance restraints.
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===Membrane-bound structure of the Pf1 major coat protein in DHPC micelle===
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Phage-Induced Alignment of Membrane Proteins Enables the Measurement and Structural Analysis of Residual Dipolar Couplings with Dipolar Waves and lambda-Maps.,Park SH, Son WS, Mukhopadhyay R, Valafar H, Opella SJ J Am Chem Soc. 2009 Sep 17. PMID:19761238<ref>PMID:19761238</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 2klv" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_19761238}}, adds the Publication Abstract to the page
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*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 19761238 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_19761238}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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2KLV is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_phage_pf1 Pseudomonas phage pf1]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KLV OCA].
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[[Category: Pseudomonas virus Pf1]]
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[[Category: Mukhopadhyay R]]
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==Reference==
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[[Category: Opella SJ]]
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<ref group="xtra">PMID:19761238</ref><references group="xtra"/>
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[[Category: Park S]]
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[[Category: Pseudomonas phage pf1]]
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[[Category: Son W]]
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[[Category: Mukhopadhyay, R.]]
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[[Category: Valafar H]]
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[[Category: Opella, S J.]]
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[[Category: Park, S.]]
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[[Category: Son, W.]]
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[[Category: Valafar, H.]]
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[[Category: Alignment]]
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[[Category: Alpha helix]]
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[[Category: Capsid protein]]
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[[Category: Membrane]]
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[[Category: Membrane protein]]
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[[Category: Transmembrane]]
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[[Category: Virion]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 7 13:58:13 2009''
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Current revision

Membrane-bound structure of the Pf1 major coat protein in DHPC micelle

PDB ID 2klv

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