This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3k0l

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:35, 26 December 2018) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3k0l.jpg|left|200px]]
 
-
<!--
+
==Crystal Structure of Putative MarR Family Transcriptional Regulator from Acinetobacter sp. ADP==
-
The line below this paragraph, containing "STRUCTURE_3k0l", creates the "Structure Box" on the page.
+
<StructureSection load='3k0l' size='340' side='right' caption='[[3k0l]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3k0l]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aciad Aciad]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K0L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K0L FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
-->
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3k0l| PDB=3k0l | SCENE= }}
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hcaR, ACIAD1728 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=62977 ACIAD])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k0l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k0l OCA], [http://pdbe.org/3k0l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3k0l RCSB], [http://www.ebi.ac.uk/pdbsum/3k0l PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3k0l ProSAT]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k0/3k0l_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k0l ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of Putative MarR Family Transcriptional Regulator from Acinetobacter sp. ADP===
+
==See Also==
-
 
+
*[[ADP-ribose pyrophosphatase|ADP-ribose pyrophosphatase]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3K0L is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Acinetobacter_sp._adp1 Acinetobacter sp. adp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K0L OCA].
+
[[Category: Aciad]]
-
[[Category: Acinetobacter sp. adp1]]
+
[[Category: Bigelow, L]]
-
[[Category: Bigelow, L.]]
+
[[Category: Cobb, G]]
-
[[Category: Cobb, G.]]
+
[[Category: Joachimiak, A]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Joachimiak, G]]
-
[[Category: Joachimiak, G.]]
+
[[Category: Kim, Y]]
-
[[Category: Kim, Y.]]
+
[[Category: Structural genomic]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Dna-binding]]
[[Category: Dna-binding]]
[[Category: Helix-turn-helix]]
[[Category: Helix-turn-helix]]
[[Category: Mcsg]]
[[Category: Mcsg]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
[[Category: Transcription]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulation]]
[[Category: Transcription regulator]]
[[Category: Transcription regulator]]
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 14 10:39:23 2009''
 

Current revision

Crystal Structure of Putative MarR Family Transcriptional Regulator from Acinetobacter sp. ADP

3k0l, resolution 2.35Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3k0l"
Personal tools