This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1xl9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1xl9" size="450" color="white" frame="true" align="right" spinBox="true" caption="1xl9, resolution 2.23&Aring;" /> '''Crystal Structure of...)
Current revision (06:47, 23 August 2023) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1xl9.gif|left|200px]]<br /><applet load="1xl9" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1xl9, resolution 2.23&Aring;" />
 
-
'''Crystal Structure of Dihydrodipicolinate Synthase DapA-2 (BA3935) from Bacillus Anthracis.'''<br />
 
-
==About this Structure==
+
==Crystal Structure of Dihydrodipicolinate Synthase DapA-2 (BA3935) from Bacillus Anthracis.==
-
1XL9 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Active as [http://en.wikipedia.org/wiki/Dihydrodipicolinate_synthase Dihydrodipicolinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.52 4.2.1.52] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA].
+
<StructureSection load='1xl9' size='340' side='right'caption='[[1xl9]], [[Resolution|resolution]] 2.23&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1xl9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XL9 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.23&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xl9 OCA], [https://pdbe.org/1xl9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xl9 RCSB], [https://www.ebi.ac.uk/pdbsum/1xl9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xl9 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A6L7H340_BACAN A0A6L7H340_BACAN] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).[ARBA:ARBA00003294][HAMAP-Rule:MF_00418]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xl/1xl9_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xl9 ConSurf].
 +
<div style="clear:both"></div>
-
==Reference==
+
==See Also==
-
Crystal structure of dihydrodipicolinate synthase (BA3935) from Bacillus anthracis at 1.94 A resolution., Blagova E, Levdikov V, Milioti N, Fogg MJ, Kalliomaa AK, Brannigan JA, Wilson KS, Wilkinson AJ, Proteins. 2006 Jan 1;62(1):297-301. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16287120 16287120]
+
*[[Dihydrodipicolinate synthase|Dihydrodipicolinate synthase]]
 +
__TOC__
 +
</StructureSection>
[[Category: Bacillus anthracis]]
[[Category: Bacillus anthracis]]
-
[[Category: Dihydrodipicolinate synthase]]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Blagova E]]
-
[[Category: Blagova, E.]]
+
[[Category: Brannigan JA]]
-
[[Category: Brannigan, J.A.]]
+
[[Category: Fogg MJ]]
-
[[Category: Fogg, M.J.]]
+
[[Category: Kalliomaa AK]]
-
[[Category: Kalliomaa, A.K.]]
+
[[Category: Levdikov V]]
-
[[Category: Levdikov, V.]]
+
[[Category: Milioti N]]
-
[[Category: Milioti, N.]]
+
[[Category: Wilkinson AJ]]
-
[[Category: Wilkinson, A.J.]]
+
[[Category: Wilson KS]]
-
[[Category: Wilson, K.S.]]
+
-
[[Category: dihydrodipicolinate synthase; tim barrel; crystal structure; lysine biosynthesis; spine]]
+
-
 
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 02:25:36 2007''
+

Current revision

Crystal Structure of Dihydrodipicolinate Synthase DapA-2 (BA3935) from Bacillus Anthracis.

PDB ID 1xl9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools