This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3icw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:05, 13 March 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3icw.png|left|200px]]
 
-
<!--
+
==Structure of a Circular Permutation on Lipase B from Candida Antartica with Bound Suicide Inhibitor==
-
The line below this paragraph, containing "STRUCTURE_3icw", creates the "Structure Box" on the page.
+
<StructureSection load='3icw' size='340' side='right'caption='[[3icw]], [[Resolution|resolution]] 1.69&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3icw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Moesziomyces_antarcticus Moesziomyces antarcticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ICW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ICW FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.69&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MHH:METHYL+HYDROGEN+(R)-HEXYLPHOSPHONATE'>MHH</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
{{STRUCTURE_3icw| PDB=3icw | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3icw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3icw OCA], [https://pdbe.org/3icw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3icw RCSB], [https://www.ebi.ac.uk/pdbsum/3icw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3icw ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LIPB_PSEA2 LIPB_PSEA2] Hydrolysis of triglycerides. Is very stereospecific both in hydrolysis and in organic synthesis and has a potentially important application in glucolipid synthesis.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ic/3icw_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3icw ConSurf].
 +
<div style="clear:both"></div>
-
===Structure of a Circular Permutation on Lipase B from Candida Antartica with Bound Suicide Inhibitor===
+
==See Also==
-
 
+
*[[Lipase 3D Structures|Lipase 3D Structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_19683009}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 19683009 is the PubMed ID number.
+
[[Category: Moesziomyces antarcticus]]
-
-->
+
[[Category: Cheng X]]
-
{{ABSTRACT_PUBMED_19683009}}
+
[[Category: Horton JR]]
-
 
+
[[Category: Jia D]]
-
==About this Structure==
+
[[Category: Lutz SA]]
-
3ICW is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Candida_antarctica Candida antarctica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ICW OCA].
+
[[Category: Qian Z]]
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:19683009</ref><references group="xtra"/>
+
-
[[Category: Candida antarctica]]
+
-
[[Category: Triacylglycerol lipase]]
+
-
[[Category: Cheng, X.]]
+
-
[[Category: Horton, J R.]]
+
-
[[Category: Jia, D.]]
+
-
[[Category: Lutz, S A.]]
+
-
[[Category: Qian, Z.]]
+
-
[[Category: Circular permutation]]
+
-
[[Category: Cleavage on pair of basic residue]]
+
-
[[Category: Disulfide bond]]
+
-
[[Category: Glycoprotein]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Lipid degradation]]
+
-
[[Category: Suicide inhibition]]
+
-
[[Category: Zymogen]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 21 09:48:07 2009''
+

Current revision

Structure of a Circular Permutation on Lipase B from Candida Antartica with Bound Suicide Inhibitor

PDB ID 3icw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3icw"
Personal tools