This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1wod

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:47, 14 February 2024) (edit) (undo)
 
(20 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1wod.gif|left|200px]]<br />
 
-
<applet load="1wod" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1wod, resolution 1.75&Aring;" />
 
-
'''CRYSTAL STRUCTURE OF MODA, A MOLYBDATE PROTEIN, COMPLEXED WITH TUNGSTATE'''<br />
 
-
==About this Structure==
+
==CRYSTAL STRUCTURE OF MODA, A MOLYBDATE PROTEIN, COMPLEXED WITH TUNGSTATE==
-
1WOD is a [[http://en.wikipedia.org/wiki/Single_protein Single protein]] structure of sequence from [[http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]] with WO4 as [[http://en.wikipedia.org/wiki/ligand ligand]]. Structure known Active Site: TUN. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1WOD OCA]].
+
<StructureSection load='1wod' size='340' side='right'caption='[[1wod]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1wod]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WOD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WOD FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=WO4:TUNGSTATE(VI)ION'>WO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wod FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wod OCA], [https://pdbe.org/1wod PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wod RCSB], [https://www.ebi.ac.uk/pdbsum/1wod PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wod ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MODA_ECOLI MODA_ECOLI] Involved in the transport of molybdenum into the cell. Binds molybdate with high specificity and affinity.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wo/1wod_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wod ConSurf].
 +
<div style="clear:both"></div>
-
==Reference==
+
==See Also==
-
Crystal structure of the molybdate binding protein ModA., Hu Y, Rech S, Gunsalus RP, Rees DC, Nat Struct Biol. 1997 Sep;4(9):703-7. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9302996 9302996]
+
*[[ABC transporter 3D structures|ABC transporter 3D structures]]
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Gunsalus, R.P.]]
+
[[Category: Gunsalus RP]]
-
[[Category: Hu, Y.]]
+
[[Category: Hu Y]]
-
[[Category: Rech, S.]]
+
[[Category: Rech S]]
-
[[Category: Rees, D.C.]]
+
[[Category: Rees DC]]
-
[[Category: WO4]]
+
-
[[Category: molybdate]]
+
-
[[Category: molybdate transport protein]]
+
-
[[Category: periplasmic]]
+
-
[[Category: tungstate]]
+
-
 
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Oct 30 08:43:04 2007''
+

Current revision

CRYSTAL STRUCTURE OF MODA, A MOLYBDATE PROTEIN, COMPLEXED WITH TUNGSTATE

PDB ID 1wod

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools