User:Tilman Schirmer/Sandbox 100

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see also preceding chapter [[User:Tilman_Schirmer/Sandbox_99|peptide bond]]
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== Secondary structure of proteins ==
== Secondary structure of proteins ==
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[[User:Tilman Schirmer/Sandbox 113|antiparallel β-sheet]]
[[User:Tilman Schirmer/Sandbox 113|antiparallel β-sheet]]
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== Anatomy of a protein ==
 
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<applet load='1tmy.pdb' size='400' frame='true' align='right' scene='User:Tilman_Schirmer/Sandbox_100/Cartoon/3' caption='1tmy'/>
 
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Response regulator receiver (Rec) domain. See also [http://proteopedia.org/wiki/index.php/1tmy 1tmy].
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Cartoon/3'>Cartoon</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Backbone/6'>C-alpha trace</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Backbone/5'>Backbone</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Ball-and-stick/2'>Ball and stick</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Beta_sheets/3'>Beta strands</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Beta_sheets_backbone/3'>Beta strands C-alpha trace</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Beta_sheets_bas/2'>Beta strands backbone</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Alpha_helix/4'>Alpha helix</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Alpha_helix_backbone/4'>Alpha helix C-alpha trace</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Alpha_helix_bas/2'>Alpha helix backbone</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Turn/5'>Turn</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Turn_backbone/6'>Turn backbone</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Turn1/1'>Turn1</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Turn2/1'>Turn2</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Turn3/1'>Turn3</scene>
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Turn4/1'>Turn4</scene>
 
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The rest are the irregular <scene name='User:Tilman_Schirmer/Sandbox_100/Loops/2'>loops</scene>.
 
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<scene name='User:Tilman_Schirmer/Sandbox_100/Loops_backbone/2'>Loops backbone</scene>
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== Next Topic ==
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[[User:Tilman_Schirmer/Sandbox_120|anatomy of a protein]]
== Notes ==
== Notes ==
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see also http://proteopedia.org/wiki/index.php/User:James_D_Watson/Structural_Templates
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see also http://proteopedia.org/wiki/index.php/User:James_D_Watson/Structural_Templates, [[Secondary_structure]]

Current revision

see also preceding chapter peptide bond

Secondary structure of proteins

outline:

Repetitive torsion angles

α-Helix

parallel β-sheet

antiparallel β-sheet


Next Topic

anatomy of a protein

Notes

see also http://proteopedia.org/wiki/index.php/User:James_D_Watson/Structural_Templates, Secondary_structure

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Tilman Schirmer

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