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2w1c

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{{Seed}}
 
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[[Image:2w1c.png|left|200px]]
 
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<!--
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==Structure determination of Aurora Kinase in complex with inhibitor==
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The line below this paragraph, containing "STRUCTURE_2w1c", creates the "Structure Box" on the page.
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<StructureSection load='2w1c' size='340' side='right'caption='[[2w1c]], [[Resolution|resolution]] 3.24&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2w1c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W1C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W1C FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=L0C:4-{[2-(4-{[(4-FLUOROPHENYL)CARBONYL]AMINO}-1H-PYRAZOL-3-YL)-1H-BENZIMIDAZOL-6-YL]METHYL}MORPHOLIN-4-IUM'>L0C</scene></td></tr>
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-->
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=TPO:PHOSPHOTHREONINE'>TPO</scene></td></tr>
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{{STRUCTURE_2w1c| PDB=2w1c | SCENE= }}
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1muo|1muo]], [[2j50|2j50]], [[1ol7|1ol7]], [[1ol6|1ol6]], [[2bmc|2bmc]], [[2c6e|2c6e]], [[2j4z|2j4z]], [[1ol5|1ol5]], [[2c6d|2c6d]], [[1mq4|1mq4]], [[2w1g|2w1g]], [[2w1f|2w1f]], [[2w1i|2w1i]], [[2w1d|2w1d]], [[2w1h|2w1h]], [[2w1e|2w1e]]</div></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Non-specific_serine/threonine_protein_kinase Non-specific serine/threonine protein kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.1 2.7.11.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w1c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w1c OCA], [https://pdbe.org/2w1c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w1c RCSB], [https://www.ebi.ac.uk/pdbsum/2w1c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w1c ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w1/2w1c_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2w1c ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Here, we describe the identification of a clinical candidate via structure-based optimization of a ligand efficient pyrazole-benzimidazole fragment. Aurora kinases play a key role in the regulation of mitosis and in recent years have become attractive targets for the treatment of cancer. X-ray crystallographic structures were generated using a novel soakable form of Aurora A and were used to drive the optimization toward potent (IC(50) approximately 3 nM) dual Aurora A/Aurora B inhibitors. These compounds inhibited growth and survival of HCT116 cells and produced the polyploid cellular phenotype typically associated with Aurora B kinase inhibition. Optimization of cellular activity and physicochemical properties ultimately led to the identification of compound 16 (AT9283). In addition to Aurora A and Aurora B, compound 16 was also found to inhibit a number of other kinases including JAK2 and Abl (T315I). This compound demonstrated in vivo efficacy in mouse xenograft models and is currently under evaluation in phase I clinical trials.
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===STRUCTURE DETERMINATION OF AURORA KINASE IN COMPLEX WITH INHIBITOR===
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Fragment-based discovery of the pyrazol-4-yl urea (AT9283), a multitargeted kinase inhibitor with potent aurora kinase activity.,Howard S, Berdini V, Boulstridge JA, Carr MG, Cross DM, Curry J, Devine LA, Early TR, Fazal L, Gill AL, Heathcote M, Maman S, Matthews JE, McMenamin RL, Navarro EF, O'Brien MA, O'Reilly M, Rees DC, Reule M, Tisi D, Williams G, Vinkovic M, Wyatt PG J Med Chem. 2009 Jan 22;52(2):379-88. PMID:19143567<ref>PMID:19143567</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 2w1c" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_19143567}}, adds the Publication Abstract to the page
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*[[Serine/threonine protein kinase 3D structures|Serine/threonine protein kinase 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 19143567 is the PubMed ID number.
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== References ==
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-->
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<references/>
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{{ABSTRACT_PUBMED_19143567}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Human]]
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2W1C is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W1C OCA].
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[[Category: Large Structures]]
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==Reference==
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<ref group="xtra">PMID:19143567</ref><references group="xtra"/>
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[[Category: Homo sapiens]]
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[[Category: Non-specific serine/threonine protein kinase]]
[[Category: Non-specific serine/threonine protein kinase]]
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[[Category: Berdini, V.]]
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[[Category: Berdini, V]]
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[[Category: Boulstridge, J A.]]
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[[Category: Boulstridge, J A]]
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[[Category: Brien, M A.O.]]
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[[Category: Brien, M A.O]]
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[[Category: Carr, M G.]]
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[[Category: Carr, M G]]
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[[Category: Cross, D M.]]
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[[Category: Cross, D M]]
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[[Category: Curry, J.]]
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[[Category: Curry, J]]
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[[Category: Devine, L A.]]
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[[Category: Devine, L A]]
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[[Category: Early, T R.]]
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[[Category: Early, T R]]
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[[Category: Fazal, L.]]
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[[Category: Fazal, L]]
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[[Category: Gill, A L.]]
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[[Category: Gill, A L]]
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[[Category: Heathcote, M.]]
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[[Category: Heathcote, M]]
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[[Category: Howard, S.]]
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[[Category: Howard, S]]
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[[Category: Maman, S.]]
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[[Category: Maman, S]]
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[[Category: Matthews, J E.]]
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[[Category: Matthews, J E]]
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[[Category: Mcmenamin, R L.]]
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[[Category: McMenamin, R L]]
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[[Category: Navarro, E F.]]
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[[Category: Navarro, E F]]
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[[Category: Rees, D C.]]
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[[Category: Rees, D C]]
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[[Category: Reilly, M O.]]
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[[Category: Reilly, M O]]
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[[Category: Reule, M.]]
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[[Category: Reule, M]]
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[[Category: Tisi, D.]]
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[[Category: Tisi, D]]
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[[Category: Vinkovic, M.]]
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[[Category: Vinkovic, M]]
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[[Category: Williams, G.]]
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[[Category: Williams, G]]
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[[Category: Wyatt, P G.]]
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[[Category: Wyatt, P G]]
[[Category: Atp-binding]]
[[Category: Atp-binding]]
[[Category: Aurora]]
[[Category: Aurora]]
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[[Category: Serine/threonine-protein kinase]]
[[Category: Serine/threonine-protein kinase]]
[[Category: Transferase]]
[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 11 20:15:04 2009''
 

Current revision

Structure determination of Aurora Kinase in complex with inhibitor

PDB ID 2w1c

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