3jrv

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{{Seed}}
 
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[[Image:3jrv.jpg|left|200px]]
 
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==Structure of poxvirus K7 protein in complex with RNA helicase DDX3==
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The line below this paragraph, containing "STRUCTURE_3jrv", creates the "Structure Box" on the page.
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<StructureSection load='3jrv' size='340' side='right'caption='[[3jrv]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3jrv]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Vaccinia_virus_WR Vaccinia virus WR]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JRV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JRV FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_3jrv| PDB=3jrv | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jrv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jrv OCA], [https://pdbe.org/3jrv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jrv RCSB], [https://www.ebi.ac.uk/pdbsum/3jrv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jrv ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PG044_VACCW PG044_VACCW] Virulence factor that affects the acute immune response to infection (PubMed:23580427). Bcl-2-like protein which, through its interaction with the DEAD box RNA helicase DDX3X/DDX3, prevents TBK1/IKKepsilon-mediated IRF3 activation. Contributes to virulence by binding to the host TRAF6 and IRAK2 and preventing host NF-kappa-B activation.<ref>PMID:18636090</ref> <ref>PMID:19913487</ref> <ref>PMID:23580427</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Poxviruses are DNA viruses that express numerous proteins to subvert the host immune response. Vaccinia virus protein K7 adopts a Bcl-2 fold and displays structural and functional similarities to Toll-like receptor antagonist A52. Both proteins interact with IRAK2 and TRAF6 and suppress TLR-dependent NF-kappaB activation. However, unlike A52, K7 also forms a complex with RNA helicase DDX3 and antagonizes interferon-beta promoter induction. We have narrowed the K7 binding site to an N-terminal peptide motif of DDX3 ahead of its core RNA-helicase domains. The crystal structure of full-length K7 in complex with the DDX3 peptide reveals a thumblike projection of tandem phenalyalanine residues of DDX3 into a deep hydrophobic cleft. Mutagenesis of these phenylalanines abolishes the effects of DDX3 on interferon-beta promoter induction. The structure of K7-DDX3 reveals a novel binding mode by a viral Bcl-2 protein that antagonizes a key pathway in innate immunity.
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===Structure of poxvirus K7 protein in complex with RNA helicase DDX3===
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Structural basis for targeting of human RNA helicase DDX3 by poxvirus protein K7.,Oda S, Schroder M, Khan AR Structure. 2009 Nov 11;17(11):1528-37. PMID:19913487<ref>PMID:19913487</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3jrv" style="background-color:#fffaf0;"></div>
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==About this Structure==
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==See Also==
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3JRV is a 5 chains structure of sequences from [http://en.wikipedia.org/wiki/Vaccinia_virus_wr Vaccinia virus wr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JRV OCA].
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*[[Helicase 3D structures|Helicase 3D structures]]
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[[Category: Vaccinia virus wr]]
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== References ==
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[[Category: Khan, R A.]]
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<references/>
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[[Category: Oda, S.]]
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__TOC__
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[[Category: Dead-box rna helicase ddx3]]
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</StructureSection>
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[[Category: Innate immunity]]
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[[Category: Homo sapiens]]
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[[Category: Poxvirus protein k7]]
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[[Category: Large Structures]]
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[[Category: Viral immune evasion]]
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[[Category: Vaccinia virus WR]]
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[[Category: Khan RA]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 11 22:33:12 2009''
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[[Category: Oda S]]

Current revision

Structure of poxvirus K7 protein in complex with RNA helicase DDX3

PDB ID 3jrv

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