3i57

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:03, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3i57.png|left|200px]]
 
-
<!--
+
==Type 2 repeat of the mucus binding protein MUB from Lactobacillus reuteri==
-
The line below this paragraph, containing "STRUCTURE_3i57", creates the "Structure Box" on the page.
+
<StructureSection load='3i57' size='340' side='right'caption='[[3i57]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3i57]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Limosilactobacillus_reuteri Limosilactobacillus reuteri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I57 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I57 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
{{STRUCTURE_3i57| PDB=3i57 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i57 OCA], [https://pdbe.org/3i57 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i57 RCSB], [https://www.ebi.ac.uk/pdbsum/3i57 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i57 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Type 2 repeat of the mucus binding protein MUB from Lactobacillus reuteri===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q9RGN5_LIMRT Q9RGN5_LIMRT]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_19758995}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 19758995 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i5/3i57_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_19758995}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
3I57 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Lactobacillus_reuteri Lactobacillus reuteri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I57 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3i57 ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:19758995</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Lactobacillus reuteri]]
+
[[Category: Large Structures]]
-
[[Category: Hemmings, A M.]]
+
[[Category: Limosilactobacillus reuteri]]
-
[[Category: Juge, N.]]
+
[[Category: Hemmings AM]]
-
[[Category: MacKenzie, D A.]]
+
[[Category: Juge N]]
-
[[Category: Tailford, L E.]]
+
[[Category: MacKenzie DA]]
-
[[Category: Beta grasp fold]]
+
[[Category: Tailford LE]]
-
[[Category: Cell wall]]
+
-
[[Category: Peptidoglycan-anchor]]
+
-
[[Category: Protein binding]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 25 10:05:25 2009''
+

Current revision

Type 2 repeat of the mucus binding protein MUB from Lactobacillus reuteri

PDB ID 3i57

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools