1ub2
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1ub2" size="450" color="white" frame="true" align="right" spinBox="true" caption="1ub2, resolution 2.40Å" /> '''Crystal structure of...) |
|||
| (16 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1ub2.jpg|left|200px]]<br /><applet load="1ub2" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1ub2, resolution 2.40Å" /> | ||
| - | '''Crystal structure of catalase-peroxidase from Synechococcus PCC 7942'''<br /> | ||
| - | == | + | ==Crystal structure of catalase-peroxidase from Synechococcus PCC 7942== |
| - | + | <StructureSection load='1ub2' size='340' side='right'caption='[[1ub2]], [[Resolution|resolution]] 2.40Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [ | + | <table><tr><td colspan='2'>[[1ub2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechococcus_elongatus_PCC_7942_=_FACHB-805 Synechococcus elongatus PCC 7942 = FACHB-805]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UB2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UB2 FirstGlance]. <br> |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> | |
| - | [ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ub2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ub2 OCA], [https://pdbe.org/1ub2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ub2 RCSB], [https://www.ebi.ac.uk/pdbsum/1ub2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ub2 ProSAT]</span></td></tr> |
| - | [ | + | </table> |
| - | + | == Function == | |
| - | [[ | + | [https://www.uniprot.org/uniprot/KATG_SYNE7 KATG_SYNE7] Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity.[HAMAP-Rule:MF_01961] |
| - | [ | + | == Evolutionary Conservation == |
| - | [[ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [ | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ub/1ub2_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ub2 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Catalase 3D structures|Catalase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Synechococcus elongatus PCC 7942 = FACHB-805]] | ||
| + | [[Category: Tada T]] | ||
| + | [[Category: Wada K]] | ||
Current revision
Crystal structure of catalase-peroxidase from Synechococcus PCC 7942
| |||||||||||
