3kkz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:56, 17 October 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3kkz.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of the Q5LES9_BACFN protein from Bacteroides fragilis. Northeast Structural Genomics Consortium Target BfR250.==
-
The line below this paragraph, containing "STRUCTURE_3kkz", creates the "Structure Box" on the page.
+
<StructureSection load='3kkz' size='340' side='right'caption='[[3kkz]], [[Resolution|resolution]] 1.68&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3kkz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis_NCTC_9343 Bacteroides fragilis NCTC 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KKZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KKZ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.677&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
-
{{STRUCTURE_3kkz| PDB=3kkz | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kkz OCA], [https://pdbe.org/3kkz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kkz RCSB], [https://www.ebi.ac.uk/pdbsum/3kkz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kkz ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of the Q5LES9_BACFN protein from Bacteroides fragilis. Northeast Structural Genomics Consortium Target BfR250.===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q5LES9_BACFN Q5LES9_BACFN]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3KKZ is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacteroides_fragilis_nctc_9343 Bacteroides fragilis nctc 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KKZ OCA].
+
Check<jmol>
-
[[Category: Bacteroides fragilis nctc 9343]]
+
<jmolCheckbox>
-
[[Category: Acton, T B.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kk/3kkz_consurf.spt"</scriptWhenChecked>
-
[[Category: Ciccosanti, C.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Everett, J K.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Foote, E L.]]
+
</jmolCheckbox>
-
[[Category: Hunt, J F.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kkz ConSurf].
-
[[Category: Montelione, G T.]]
+
<div style="clear:both"></div>
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
__TOC__
-
[[Category: Neely, H.]]
+
</StructureSection>
-
[[Category: Sahdev, S.]]
+
[[Category: Bacteroides fragilis NCTC 9343]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Large Structures]]
-
[[Category: Tong, L.]]
+
[[Category: Acton TB]]
-
[[Category: Vorobiev, S.]]
+
[[Category: Ciccosanti C]]
-
[[Category: Wang, D.]]
+
[[Category: Everett JK]]
-
[[Category: Xiao, R.]]
+
[[Category: Foote EL]]
-
[[Category: Bfr250]]
+
[[Category: Hunt JF]]
-
[[Category: Nesg]]
+
[[Category: Montelione GT]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Neely H]]
-
[[Category: Protein structure initiative]]
+
[[Category: Sahdev S]]
-
[[Category: Psi-2]]
+
[[Category: Seetharaman J]]
-
[[Category: Putative methyltransferase]]
+
[[Category: Tong L]]
-
[[Category: Structural genomic]]
+
[[Category: Vorobiev S]]
-
 
+
[[Category: Wang D]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 25 10:21:30 2009''
+
[[Category: Xiao R]]

Current revision

Crystal structure of the Q5LES9_BACFN protein from Bacteroides fragilis. Northeast Structural Genomics Consortium Target BfR250.

PDB ID 3kkz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3kkz"
Personal tools