This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ila

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:05, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3ila.png|left|200px]]
 
-
<!--
+
==Crystal structure of rabbit ryanodine receptor 1 N-terminal domain (9-205)==
-
The line below this paragraph, containing "STRUCTURE_3ila", creates the "Structure Box" on the page.
+
<StructureSection load='3ila' size='340' side='right'caption='[[3ila]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3ila]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ILA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ILA FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ila FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ila OCA], [https://pdbe.org/3ila PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ila RCSB], [https://www.ebi.ac.uk/pdbsum/3ila PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ila ProSAT]</span></td></tr>
-
{{STRUCTURE_3ila| PDB=3ila | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RYR1_RABIT RYR1_RABIT] Calcium channel that mediates the release of Ca(2+) from the sarcoplasmic reticulum into the cytoplasm and thereby plays a key role in triggering muscle contraction following depolarization of T-tubules. Repeated very high-level exercise increases the open probability of the channel and leads to Ca(2+) leaking into the cytoplasm. Can also mediate the release of Ca(2+) from intracellular stores in neurons, and may thereby promote prolonged Ca(2+) signaling in the brain. Required for normal embryonic development of muscle fibers and skeletal muscle. Required for normal heart morphogenesis, skin development and ossification during embryogenesis (By similarity).<ref>PMID:10388749</ref> <ref>PMID:22036948</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/il/3ila_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ila ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of rabbit ryanodine receptor 1 N-terminal domain (9-205)===
+
==See Also==
-
 
+
*[[Ryanodine receptor 3D structures|Ryanodine receptor 3D structures]]
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_19913485}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 19913485 is the PubMed ID number.
+
</StructureSection>
-
-->
+
[[Category: Large Structures]]
-
{{ABSTRACT_PUBMED_19913485}}
+
-
 
+
-
==About this Structure==
+
-
3ILA is a 9 chains structure of sequences from [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ILA OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:19913485</ref><references group="xtra"/>
+
[[Category: Oryctolagus cuniculus]]
[[Category: Oryctolagus cuniculus]]
-
[[Category: Lobo, P A.]]
+
[[Category: Lobo PA]]
-
[[Category: Petegem, F Van.]]
+
[[Category: Van Petegem F]]
-
[[Category: Beta trefoil]]
+
-
[[Category: Calcium]]
+
-
[[Category: Calcium channel]]
+
-
[[Category: Calcium transport]]
+
-
[[Category: Glycoprotein]]
+
-
[[Category: Ion transport]]
+
-
[[Category: Ionic channel]]
+
-
[[Category: Membrane]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Receptor]]
+
-
[[Category: S-nitrosylation]]
+
-
[[Category: Transmembrane]]
+
-
[[Category: Transport]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 2 09:26:00 2009''
+

Current revision

Crystal structure of rabbit ryanodine receptor 1 N-terminal domain (9-205)

PDB ID 3ila

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3ila"
Personal tools