This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3kwm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 3kwm is ON HOLD Authors: Orlikowska, M., Rostankowski, R., Nakka, C., Hattne, J., Grimshaw, S., Borek, D., Otwinowski, Z., Center for Structural Gen...)
Current revision (08:26, 6 September 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3kwm is ON HOLD
+
==Crystal structure of ribose-5-isomerase A==
 +
<StructureSection load='3kwm' size='340' side='right'caption='[[3kwm]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3kwm]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Francisella_tularensis_subsp._tularensis Francisella tularensis subsp. tularensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KWM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KWM FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.32&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3GR:GLYCERALDEHYDE'>3GR</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kwm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kwm OCA], [https://pdbe.org/3kwm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kwm RCSB], [https://www.ebi.ac.uk/pdbsum/3kwm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kwm ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RPIA_FRATT RPIA_FRATT]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kw/3kwm_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kwm ConSurf].
 +
<div style="clear:both"></div>
-
Authors: Orlikowska, M., Rostankowski, R., Nakka, C., Hattne, J., Grimshaw, S., Borek, D., Otwinowski, Z., Center for Structural Genomics of Infectious Diseases (CSGID)
+
==See Also==
-
 
+
*[[Ribose-5-phosphate isomerase 3D structures|Ribose-5-phosphate isomerase 3D structures]]
-
Description: Crystal structure of ribose-5-isomerase A
+
__TOC__
-
 
+
</StructureSection>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 9 14:45:31 2009''
+
[[Category: Francisella tularensis subsp. tularensis]]
 +
[[Category: Large Structures]]
 +
[[Category: Borek D]]
 +
[[Category: Grimshaw S]]
 +
[[Category: Hattne J]]
 +
[[Category: Nakka C]]
 +
[[Category: Orlikowska M]]
 +
[[Category: Otwinowski Z]]
 +
[[Category: Rostankowski R]]

Current revision

Crystal structure of ribose-5-isomerase A

PDB ID 3kwm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools