3ab0

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'''Unreleased structure'''
 
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The entry 3ab0 is ON HOLD
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==Crystal structure of complex of the Bacillus anthracis major spore surface protein BclA with ScFv antibody fragment==
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<StructureSection load='3ab0' size='340' side='right'caption='[[3ab0]], [[Resolution|resolution]] 3.09&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3ab0]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_str._'34F2_(NMRC)' Bacillus anthracis str. '34F2 (NMRC)'] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AB0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AB0 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.09&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ab0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ab0 OCA], [https://pdbe.org/3ab0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ab0 RCSB], [https://www.ebi.ac.uk/pdbsum/3ab0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ab0 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q83WB0_BACAN Q83WB0_BACAN]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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One method of laboratory- or field-based testing for anthrax is detection of Bacillus anthracis spores by high-affinity, high specificity binding reagents. From a pool of monoclonal antibodies, we selected one such candidate (A4D11) with high affinity for tBclA, a truncated version of the B. anthracis exosporium protein BclA. Kinetic analysis utilising both standard and kinetic titration on a Biacore biosensor indicated antibody affinities in the 300 pM range for recombinant tBclA, and the A4D11 antibody was also re-formatted into scFv configuration with no loss of affinity. However, assays against B. anthracis and related Bacilli species showed limited binding of intact spores as well as significant cross-reactivity between species. These results were rationalized by determination of the three-dimensional crystallographic structure of the scFv-tBclA complex. A4D11 binds the side of the tBclA trimer, contacting a face of the antigen normally packed against adjacent trimers within the exosporium structure; this inter-spore interface is highly conserved between Bacilli species. Our results indicate the difficulty of generating a high-affinity antibody to differentiate between the highly conserved spore structures of closely related species, but suggest the possibility of future structure-based antibody design for this difficult target.
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Authors: Streltsov, V.A.
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Isolation, kinetic analysis, and structural characterization of an antibody targeting the Bacillus anthracis major spore surface protein BclA.,Nuttall SD, Wilkins ML, Streltsov VA, Pontes-Braz L, Dolezal O, Tran H, Liu CQ Proteins. 2011 Apr;79(4):1306-17. doi: 10.1002/prot.22971. Epub 2011 Feb 14. PMID:21322055<ref>PMID:21322055</ref>
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Description: Crystal structure of complex of the Bacillus anthracis major spore surface protein BclA with ScFv antibody fragment
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3ab0" style="background-color:#fffaf0;"></div>
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 16 12:23:29 2009''
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==See Also==
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*[[Antibody 3D structures|Antibody 3D structures]]
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*[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]]
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*[[3D structures of non-human antibody|3D structures of non-human antibody]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Mus musculus]]
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[[Category: Streltsov VA]]

Current revision

Crystal structure of complex of the Bacillus anthracis major spore surface protein BclA with ScFv antibody fragment

PDB ID 3ab0

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