This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3kd3
From Proteopedia
(Difference between revisions)
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
| - | [[Image:3kd3.jpg|left|200px]] | ||
| - | + | ==Crystal structure of a phosphoserine phosphohydrolase-like protein from Francisella tularensis subsp. tularensis SCHU S4== | |
| - | + | <StructureSection load='3kd3' size='340' side='right' caption='[[3kd3]], [[Resolution|resolution]] 1.70Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3kd3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"francisella_tularensis_subsp._nearctica"_olsufjev_1970 "francisella tularensis subsp. nearctica" olsufjev 1970]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KD3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KD3 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FTT0568, FTT_0568 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119856 "Francisella tularensis subsp. nearctica" Olsufjev 1970])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kd3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kd3 OCA], [http://pdbe.org/3kd3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kd3 RCSB], [http://www.ebi.ac.uk/pdbsum/3kd3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kd3 ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | == | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | [[ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kd/3kd3_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Anderson, W | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Joachimiak, A | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Nocek, B | + | </jmolCheckbox> |
| - | [[Category: Peterson, S | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kd3 ConSurf]. |
| - | [[Category: Zhou, M | + | <div style="clear:both"></div> |
| - | + | __TOC__ | |
| + | </StructureSection> | ||
| + | [[Category: Francisella tularensis subsp. nearctica olsufjev 1970]] | ||
| + | [[Category: Anderson, W]] | ||
| + | [[Category: CSGID]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Nocek, B]] | ||
| + | [[Category: Peterson, S]] | ||
| + | [[Category: Zhou, M]] | ||
[[Category: Csgid]] | [[Category: Csgid]] | ||
| - | [[Category: Niaid]] | ||
[[Category: Phosphoserine phosphohydrolase-like protein]] | [[Category: Phosphoserine phosphohydrolase-like protein]] | ||
| - | [[Category: | + | [[Category: Unknown function]] |
| - | + | ||
| - | + | ||
Current revision
Crystal structure of a phosphoserine phosphohydrolase-like protein from Francisella tularensis subsp. tularensis SCHU S4
| |||||||||||

