This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3i7f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:04, 21 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3i7f.png|left|200px]]
 
-
<!--
+
==Aspartyl tRNA synthetase from Entamoeba histolytica==
-
The line below this paragraph, containing "STRUCTURE_3i7f", creates the "Structure Box" on the page.
+
<StructureSection load='3i7f' size='340' side='right'caption='[[3i7f]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3i7f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Entamoeba_histolytica Entamoeba histolytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I7F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I7F FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i7f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i7f OCA], [https://pdbe.org/3i7f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i7f RCSB], [https://www.ebi.ac.uk/pdbsum/3i7f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i7f ProSAT]</span></td></tr>
-
{{STRUCTURE_3i7f| PDB=3i7f | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/C4LZN0_ENTH1 C4LZN0_ENTH1]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i7/3i7f_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3i7f ConSurf].
 +
<div style="clear:both"></div>
-
===Aspartyl tRNA synthetase from Entamoeba histolytica===
+
==See Also==
-
 
+
*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3I7F is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Entamoeba_histolytica Entamoeba histolytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I7F OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:19874856</ref><references group="xtra"/>
+
-
[[Category: Aspartate--tRNA ligase]]
+
[[Category: Entamoeba histolytica]]
[[Category: Entamoeba histolytica]]
-
[[Category: Arakaki, T.]]
+
[[Category: Large Structures]]
-
[[Category: MSGPP, Medical Structural Genomics of Pathogenic Protozoa.]]
+
[[Category: Arakaki T]]
-
[[Category: Merritt, E A.]]
+
[[Category: Merritt EA]]
-
[[Category: Aminoacyl-trna synthetase]]
+
-
[[Category: Apo]]
+
-
[[Category: Atp-binding]]
+
-
[[Category: Ligase]]
+
-
[[Category: Medical structural genomics of pathogenic protozoa]]
+
-
[[Category: Msgpp]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Protein biosynthesis]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Trna ligase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 23 08:54:50 2009''
+

Current revision

Aspartyl tRNA synthetase from Entamoeba histolytica

PDB ID 3i7f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools