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3k13

From Proteopedia

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{{Seed}}
 
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[[Image:3k13.jpg|left|200px]]
 
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==Structure of the pterin-binding domain MeTr of 5-methyltetrahydrofolate-homocysteine methyltransferase from Bacteroides thetaiotaomicron==
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The line below this paragraph, containing "STRUCTURE_3k13", creates the "Structure Box" on the page.
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<StructureSection load='3k13' size='340' side='right' caption='[[3k13]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3k13]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_thetaiotaomicron"_distaso_1912 "bacillus thetaiotaomicron" distaso 1912]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K13 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K13 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=THH:N-[4-({[(6S)-2-AMINO-4-HYDROXY-5-METHYL-5,6,7,8-TETRAHYDROPTERIDIN-6-YL]METHYL}AMINO)BENZOYL]-L-GLUTAMIC+ACID'>THH</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_3k13| PDB=3k13 | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BT_0180 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=818 "Bacillus thetaiotaomicron" Distaso 1912])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k13 OCA], [http://pdbe.org/3k13 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3k13 RCSB], [http://www.ebi.ac.uk/pdbsum/3k13 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3k13 ProSAT]</span></td></tr>
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===Structure of the pterin-binding domain MeTr of 5-methyltetrahydrofolate-homocysteine methyltransferase from Bacteroides thetaiotaomicron===
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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3K13 is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K13 OCA].
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<jmolCheckbox>
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[[Category: Bacteroides thetaiotaomicron]]
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k1/3k13_consurf.spt"</scriptWhenChecked>
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[[Category: Cobb, G.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Cuff, M E.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Joachimiak, A.]]
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</jmolCheckbox>
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[[Category: Li, H.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k13 ConSurf].
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[[Category: MCSG, Midwest Center for Structural Genomics.]]
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
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[[Category: Bacillus thetaiotaomicron distaso 1912]]
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[[Category: Cobb, G]]
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[[Category: Cuff, M E]]
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[[Category: Joachimiak, A]]
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[[Category: Li, H]]
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[[Category: Structural genomic]]
[[Category: 5-methyltetrahydrofolate]]
[[Category: 5-methyltetrahydrofolate]]
[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Methyltransferase]]
[[Category: Methyltransferase]]
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[[Category: Midwest center for structural genomic]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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[[Category: Tim barrel]]
[[Category: Tim barrel]]
[[Category: Transferase]]
[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 23 10:14:27 2009''
 

Current revision

Structure of the pterin-binding domain MeTr of 5-methyltetrahydrofolate-homocysteine methyltransferase from Bacteroides thetaiotaomicron

3k13, resolution 2.00Å

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