This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3l6d
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3l6d is ON HOLD Authors: V.N.MALASHKEVICH, Y.PATSKOVSKY, R.TORO, M.J.SAUDER, S.K.BURLEY, S.C.ALMO Description: CRYSTAL STRUCTURE OF putative oxidor...) |
|||
| (7 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of putative oxidoreductase from Pseudomonas putida KT2440== | |
| - | + | <StructureSection load='3l6d' size='340' side='right' caption='[[3l6d]], [[Resolution|resolution]] 1.90Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3l6d]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Psepk Psepk]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L6D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3L6D FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NP_744942.1, PP2798 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=160488 PSEPK])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3l6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l6d OCA], [http://pdbe.org/3l6d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3l6d RCSB], [http://www.ebi.ac.uk/pdbsum/3l6d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3l6d ProSAT]</span></td></tr> | |
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l6/3l6d_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3l6d ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Psepk]] | ||
| + | [[Category: Almo, S C]] | ||
| + | [[Category: Burley, S K]] | ||
| + | [[Category: Malashkevich, V N]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Patskovsky, Y]] | ||
| + | [[Category: Sauder, J M]] | ||
| + | [[Category: Toro, R]] | ||
| + | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] | ||
| + | [[Category: Oxidoreductase]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
Current revision
Crystal structure of putative oxidoreductase from Pseudomonas putida KT2440
| |||||||||||
