1yw0

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(New page: 200px<br /><applet load="1yw0" size="450" color="white" frame="true" align="right" spinBox="true" caption="1yw0, resolution 2.70&Aring;" /> '''Crystal structure of...)
Current revision (07:32, 9 October 2024) (edit) (undo)
 
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[[Image:1yw0.gif|left|200px]]<br /><applet load="1yw0" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1yw0, resolution 2.70&Aring;" />
 
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'''Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13.'''<br />
 
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==About this Structure==
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==Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13.==
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1YW0 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Xanthomonas_campestris_pv._campestris_str._atcc_33913 Xanthomonas campestris pv. campestris str. atcc 33913] with MG as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Tryptophan_2,3-dioxygenase Tryptophan 2,3-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.11 1.13.11.11] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1YW0 OCA].
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<StructureSection load='1yw0' size='340' side='right'caption='[[1yw0]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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[[Category: Single protein]]
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== Structural highlights ==
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[[Category: Tryptophan 2,3-dioxygenase]]
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<table><tr><td colspan='2'>[[1yw0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_campestris_pv._campestris_str._ATCC_33913 Xanthomonas campestris pv. campestris str. ATCC 33913]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YW0 FirstGlance]. <br>
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[[Category: Xanthomonas campestris pv. campestris str. atcc 33913]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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[[Category: Abashidze, M.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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[[Category: Aton, T.B.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yw0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw0 OCA], [https://pdbe.org/1yw0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yw0 RCSB], [https://www.ebi.ac.uk/pdbsum/1yw0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yw0 ProSAT], [https://www.topsan.org/Proteins/NESGC/1yw0 TOPSAN]</span></td></tr>
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[[Category: Ciano, M.]]
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</table>
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[[Category: Forouhar, F.]]
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== Function ==
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[[Category: Hunt, J.F.]]
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[https://www.uniprot.org/uniprot/T23O_XANCP T23O_XANCP] Catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring.[HAMAP-Rule:MF_01972]<ref>PMID:17197414</ref> <ref>PMID:18783250</ref>
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[[Category: Kuzin, A.]]
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== Evolutionary Conservation ==
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[[Category: Montelione, G.T.]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
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Check<jmol>
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[[Category: Tong, L.]]
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<jmolCheckbox>
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[[Category: Vorobiev, S.M.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/1yw0_consurf.spt"</scriptWhenChecked>
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[[Category: Xiao, R.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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[[Category: MG]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: dioxygenase]]
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</jmolCheckbox>
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[[Category: nesg]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yw0 ConSurf].
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[[Category: northeast structural genomics consortium]]
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<div style="clear:both"></div>
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[[Category: protein structure initiative]]
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[[Category: psi]]
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[[Category: structural genomics]]
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[[Category: tryptophan]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 04:36:53 2007''
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==See Also==
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*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Xanthomonas campestris pv. campestris str. ATCC 33913]]
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[[Category: Abashidze M]]
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[[Category: Aton TB]]
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[[Category: Ciano M]]
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[[Category: Forouhar F]]
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[[Category: Hunt JF]]
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[[Category: Kuzin A]]
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[[Category: Montelione GT]]
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[[Category: Tong L]]
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[[Category: Vorobiev SM]]
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[[Category: Xiao R]]

Current revision

Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13.

PDB ID 1yw0

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