1zbr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1zbr" size="450" color="white" frame="true" align="right" spinBox="true" caption="1zbr, resolution 2.60&Aring;" /> '''Crystal Structure of...)
Current revision (07:45, 30 October 2024) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1zbr.gif|left|200px]]<br /><applet load="1zbr" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1zbr, resolution 2.60&Aring;" />
 
-
'''Crystal Structure of the Putative Arginine Deiminase from Porphyromonas gingivalis, Northeast Structural Genomics Target PgR3'''<br />
 
-
==About this Structure==
+
==Crystal Structure of the Putative Arginine Deiminase from Porphyromonas gingivalis, Northeast Structural Genomics Target PgR3==
-
1ZBR is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis_w83 Porphyromonas gingivalis w83]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1ZBR OCA].
+
<StructureSection load='1zbr' size='340' side='right'caption='[[1zbr]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
[[Category: Porphyromonas gingivalis w83]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[1zbr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis_W83 Porphyromonas gingivalis W83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZBR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZBR FirstGlance]. <br>
-
[[Category: Acton, T.B.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
[[Category: Chen, Y.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Conover, K.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zbr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zbr OCA], [https://pdbe.org/1zbr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zbr RCSB], [https://www.ebi.ac.uk/pdbsum/1zbr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zbr ProSAT], [https://www.topsan.org/Proteins/NESGC/1zbr TOPSAN]</span></td></tr>
-
[[Category: Forouhar, F.]]
+
</table>
-
[[Category: Hunt, J.F.]]
+
== Function ==
-
[[Category: Kuzin, A.]]
+
[https://www.uniprot.org/uniprot/Q7MXM8_PORGI Q7MXM8_PORGI]
-
[[Category: Montelione, G.T.]]
+
== Evolutionary Conservation ==
-
[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Tong, L.]]
+
Check<jmol>
-
[[Category: alpha-beta protein.]]
+
<jmolCheckbox>
-
[[Category: nesg]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zb/1zbr_consurf.spt"</scriptWhenChecked>
-
[[Category: northeast structural genomics consortium]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: protein structure initiative]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: psi]]
+
</jmolCheckbox>
-
[[Category: structural genomics]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zbr ConSurf].
-
 
+
<div style="clear:both"></div>
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 04:48:49 2007''
+
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Porphyromonas gingivalis W83]]
 +
[[Category: Acton TB]]
 +
[[Category: Chen Y]]
 +
[[Category: Conover K]]
 +
[[Category: Forouhar F]]
 +
[[Category: Hunt JF]]
 +
[[Category: Kuzin A]]
 +
[[Category: Montelione GT]]
 +
[[Category: Tong L]]

Current revision

Crystal Structure of the Putative Arginine Deiminase from Porphyromonas gingivalis, Northeast Structural Genomics Target PgR3

PDB ID 1zbr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools