2nxv

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{{Seed}}
 
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[[Image:2nxv.png|left|200px]]
 
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==Structure of the 6th ORF of the Rhodobacter blastica ATPase operon; Majastridin==
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The line below this paragraph, containing "STRUCTURE_2nxv", creates the "Structure Box" on the page.
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<StructureSection load='2nxv' size='340' side='right'caption='[[2nxv]], [[Resolution|resolution]] 1.10&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2nxv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Fuscovulum_blasticum Fuscovulum blasticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NXV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NXV FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.1&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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{{STRUCTURE_2nxv| PDB=2nxv | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nxv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nxv OCA], [https://pdbe.org/2nxv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nxv RCSB], [https://www.ebi.ac.uk/pdbsum/2nxv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nxv ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/YAT6_FUSBL YAT6_FUSBL]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nx/2nxv_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nxv ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The F1-ATP synthase atp operon in the proteobacterium Rhodobacter blasticus contains six open reading frames, encoding six hypothetical proteins. Five of these subunits, in the stoichiometry (alphabeta)3gamma delta epsilon make up the catalytic F1-ATP synthase complex similarly in bacteria, chloroplasts and mitochondria. The sixth gene of the R. blasticus atp operon, urf6, shows very little sequence homology to any protein of known structure or function. The gene has previously been cloned, the product (called majastridin) has been heterologously expressed in Escherichia coli, and purified to high homogeneity [M. Brosche, I. Kalbina, M. Arnfelt, G. Benito, B.G. Karlsson, A. Strid, Occurrence, overexpression and partial purification of the protein (majastridin) corresponding to the URF6 gene of the Rhodobacter blasticus atp operon, Eur. J. Biochem. 255 (1998) 87-92]. We have solved the X-ray crystal structure and refined a model of majastridin to atomic resolution. Here we present the crystal structures of apo-majastridin and the complex of majastridin with Mn2+ and UDP and show that it has extensive structural similarity to glycosyltransferases (EC 2.4). This is the first structure determined from a new group of distantly related bacterial proteins of at least six members. They share the identical amino acids that bind Mn2+ and a triplet of amino acids in the putative sugar-binding site.
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===Structure of the 6th ORF of the Rhodobacter blastica ATPase operon; Majastridin===
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Crystal structure of a protein, structurally related to glycosyltransferases, encoded in the Rhodobacter blasticus atp operon.,Enroth C, Strid A Biochim Biophys Acta. 2008 Feb;1784(2):379-84. Epub 2007 Nov 19. PMID:18067873<ref>PMID:18067873</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_18067873}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2nxv" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 18067873 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_18067873}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Fuscovulum blasticum]]
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2NXV is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Rhodobacter_blasticus Rhodobacter blasticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NXV OCA].
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[[Category: Large Structures]]
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[[Category: Enroth C]]
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==Reference==
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[[Category: Strid A]]
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<ref group="xtra">PMID:18067873</ref><references group="xtra"/>
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[[Category: Rhodobacter blasticus]]
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[[Category: Enroth, C.]]
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[[Category: Strid, A.]]
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[[Category: Atpase operon]]
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[[Category: Glycosyl transferase]]
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[[Category: Majastridin]]
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[[Category: Rossmann fold]]
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[[Category: Sulphur sad]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 20 12:45:01 2010''
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Current revision

Structure of the 6th ORF of the Rhodobacter blastica ATPase operon; Majastridin

PDB ID 2nxv

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