2kgj

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{{Seed}}
 
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[[Image:2kgj.jpg|left|200px]]
 
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==Solution structure of parvulin domain of PpiD from E.Coli==
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The line below this paragraph, containing "STRUCTURE_2kgj", creates the "Structure Box" on the page.
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<StructureSection load='2kgj' size='340' side='right'caption='[[2kgj]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2kgj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KGJ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kgj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kgj OCA], [https://pdbe.org/2kgj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kgj RCSB], [https://www.ebi.ac.uk/pdbsum/2kgj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kgj ProSAT]</span></td></tr>
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{{STRUCTURE_2kgj| PDB=2kgj | SCENE= }}
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</table>
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== Function ==
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===Solution structure of parvulin domain of PpiD from E.Coli===
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[https://www.uniprot.org/uniprot/PPID_ECOLI PPID_ECOLI] PPIases accelerate the folding of proteins. Seems to be involved in the folding of outer membrane proteins. Its preference at the P1 position of the peptide substrate is Glu > Leu > Ala > His > Val > Phe > Ile > Gly > Lys > Thr.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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The line below this paragraph, {{ABSTRACT_PUBMED_19866485}}, adds the Publication Abstract to the page
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<jmolCheckbox>
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(as it appears on PubMed at http://www.pubmed.gov), where 19866485 is the PubMed ID number.
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kg/2kgj_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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{{ABSTRACT_PUBMED_19866485}}
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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==About this Structure==
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kgj ConSurf].
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2KGJ is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGJ OCA].
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<div style="clear:both"></div>
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__TOC__
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==Reference==
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</StructureSection>
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<ref group="xtra">PMID:19866485</ref><references group="xtra"/>
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[[Category: Escherichia coli K-12]]
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[[Category: Escherichia coli]]
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[[Category: Large Structures]]
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[[Category: Peptidylprolyl isomerase]]
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[[Category: Jakob RP]]
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[[Category: Jakob, R P.]]
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[[Category: Weininger U]]
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[[Category: Weininger, U.]]
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[[Category: Cell inner membrane]]
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[[Category: Cell membrane]]
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[[Category: Isomerase]]
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[[Category: Membrane]]
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[[Category: Parvulin]]
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[[Category: Prolyl isomerase]]
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[[Category: Rotamase]]
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[[Category: Stress response]]
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[[Category: Transmembrane]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 20 15:06:25 2010''
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Current revision

Solution structure of parvulin domain of PpiD from E.Coli

PDB ID 2kgj

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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