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3kw2

From Proteopedia

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{{Seed}}
 
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[[Image:3kw2.jpg|left|200px]]
 
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==Crystal structure of probable rRNA-methyltransferase from Porphyromonas gingivalis==
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The line below this paragraph, containing "STRUCTURE_3kw2", creates the "Structure Box" on the page.
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<StructureSection load='3kw2' size='340' side='right' caption='[[3kw2]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3kw2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Porg3 Porg3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KW2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KW2 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADN:ADENOSINE'>ADN</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_3kw2| PDB=3kw2 | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PGN_0201 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=431947 PORG3])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kw2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kw2 OCA], [http://pdbe.org/3kw2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kw2 RCSB], [http://www.ebi.ac.uk/pdbsum/3kw2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kw2 ProSAT]</span></td></tr>
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===Crystal structure of probable rRNA-methyltransferase from Porphyromonas gingivalis===
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/B2RH75_PORG3 B2RH75_PORG3]] Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (By similarity).[PIRNR:PIRNR015601]
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==About this Structure==
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== Evolutionary Conservation ==
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3KW2 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis_atcc_33277 Porphyromonas gingivalis atcc 33277]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KW2 OCA].
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Porphyromonas gingivalis atcc 33277]]
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Check<jmol>
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[[Category: Almo, S C.]]
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<jmolCheckbox>
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[[Category: Burley, S K.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kw/3kw2_consurf.spt"</scriptWhenChecked>
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Ramagopal, U A.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Toro, R.]]
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</jmolCheckbox>
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[[Category: New york sgx research center for structural genomic]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kw2 ConSurf].
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[[Category: Nysgxrc]]
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<div style="clear:both"></div>
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[[Category: Protein structure initiative]]
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__TOC__
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[[Category: Psi-2]]
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</StructureSection>
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[[Category: Porg3]]
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[[Category: Almo, S C]]
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[[Category: Burley, S K]]
[[Category: Structural genomic]]
[[Category: Structural genomic]]
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[[Category: Ramagopal, U A]]
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[[Category: Toro, R]]
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Transferase]]
[[Category: Unknown function]]
[[Category: Unknown function]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 20 16:04:42 2010''
 

Current revision

Crystal structure of probable rRNA-methyltransferase from Porphyromonas gingivalis

3kw2, resolution 2.00Å

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