3lay

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:19, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3lay.jpg|left|200px]]
 
-
<!--
+
==Alpha-Helical barrel formed by the decamer of the zinc resistance-associated protein (STM4172) from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2==
-
The line below this paragraph, containing "STRUCTURE_3lay", creates the "Structure Box" on the page.
+
<StructureSection load='3lay' size='340' side='right'caption='[[3lay]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3lay]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LAY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LAY FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lay FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lay OCA], [https://pdbe.org/3lay PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lay RCSB], [https://www.ebi.ac.uk/pdbsum/3lay PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lay ProSAT]</span></td></tr>
-
{{STRUCTURE_3lay| PDB=3lay | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Alpha-Helical barrel formed by the decamer of the zinc resistance-associated protein (STM4172) from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2===
+
[https://www.uniprot.org/uniprot/ZRAP_SALTY ZRAP_SALTY] Binds zinc. Could be an important component of the zinc-balancing mechanism (By similarity).
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
3LAY is a 10 chains structure with sequences from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LAY OCA].
+
<jmolCheckbox>
-
[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/la/3lay_consurf.spt"</scriptWhenChecked>
-
[[Category: Anderson, W F.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Dubrovska, I.]]
+
</jmolCheckbox>
-
[[Category: Filippova, E V.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lay ConSurf].
-
[[Category: Minasov, G.]]
+
<div style="clear:both"></div>
-
[[Category: Shuvalova, L.]]
+
__TOC__
-
[[Category: Winsor, J.]]
+
</StructureSection>
-
[[Category: Center for structural genomics of infectious disease]]
+
[[Category: Large Structures]]
-
[[Category: Csgid]]
+
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
-
[[Category: Periplasm]]
+
[[Category: Anderson WF]]
-
[[Category: Salmonella typhimurium lt2]]
+
[[Category: Dubrovska I]]
-
[[Category: Structural genomic]]
+
[[Category: Filippova EV]]
-
[[Category: Zinc]]
+
[[Category: Minasov G]]
-
[[Category: Zinc resistance-associated protein]]
+
[[Category: Shuvalova L]]
-
[[Category: Zrap]]
+
[[Category: Winsor J]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 20 16:12:26 2010''
+

Current revision

Alpha-Helical barrel formed by the decamer of the zinc resistance-associated protein (STM4172) from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2

PDB ID 3lay

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3lay"
Personal tools