3it2

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{{Seed}}
 
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[[Image:3it2.png|left|200px]]
 
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==Crystal structure of ligand-free Francisella tularensis histidine acid phosphatase==
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The line below this paragraph, containing "STRUCTURE_3it2", creates the "Structure Box" on the page.
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<StructureSection load='3it2' size='340' side='right'caption='[[3it2]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3it2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Francisella_tularensis_subsp._holarctica_LVS Francisella tularensis subsp. holarctica LVS]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2glb 2glb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IT2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IT2 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.838&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
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{{STRUCTURE_3it2| PDB=3it2 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3it2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3it2 OCA], [https://pdbe.org/3it2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3it2 RCSB], [https://www.ebi.ac.uk/pdbsum/3it2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3it2 ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/it/3it2_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3it2 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Histidine acid phosphatases catalyze the transfer of a phosphoryl group from phosphomonoesters to water at acidic pH using an active-site histidine. The histidine acid phosphatase from the category A pathogen Francisella tularensis (FtHAP) has been implicated in intramacrophage survival and virulence, motivating interest in understanding the structure and mechanism of this enzyme. Here, we report a structure-based study of ligand recognition by FtHAP. The 1.70-A-resolution structure of FtHAP complexed with the competitive inhibitor l(+)-tartrate was solved using single-wavelength anomalous diffraction phasing. Structures of the ligand-free enzyme and the complex with inorganic phosphate were determined at resolutions of 1.85 and 1.70 A, respectively. The structure of the Asp261Ala mutant enzyme complexed with the substrate 3'-AMP was determined at 1.50 A resolution to gain insight into substrate recognition. FtHAP exhibits a two-domain fold similar to that of human prostatic acid phosphatase, consisting of an alpha/beta core domain and a smaller domain that caps the core domain. The structures show that the core domain supplies the phosphoryl binding site, catalytic histidine (His17), and an aspartic acid residue (Asp261) that protonates the leaving group, while the cap domain contributes residues that enforce substrate preference. FtHAP and human prostatic acid phosphatase differ in the orientation of the crucial first helix of the cap domain, implying differences in the substrate preferences of the two enzymes. 3'-AMP binds in one end of a 15-A-long tunnel, with the adenine clamped between Phe23 and Tyr135, and the ribose 2'-hydroxyl interacting with Gln132. The importance of the clamp is confirmed with site-directed mutagenesis; mutation of Phe23 and Tyr135 individually to Ala increases K(m) by factors of 7 and 10, respectively. The structural data are consistent with a role for FtHAP in scavenging phosphate from small molecules present in host macrophage cells.
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===Crystal structure of ligand-free Francisella tularensis histidine acid phosphatase===
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Crystal Structures of the histidine acid phosphatase from Francisella tularensis provide insight into substrate recognition.,Singh H, Felts RL, Schuermann JP, Reilly TJ, Tanner JJ J Mol Biol. 2009 Dec 18;394(5):893-904. Epub 2009 Oct 21. PMID:19836403<ref>PMID:19836403</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3it2" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_19836403}}, adds the Publication Abstract to the page
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*[[Acid phosphatase 3D structures|Acid phosphatase 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 19836403 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_19836403}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Francisella tularensis subsp. holarctica LVS]]
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3IT2 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Francisella_tularensis_subsp._holarctica_lvs Francisella tularensis subsp. holarctica lvs]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2glb 2glb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IT2 OCA].
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[[Category: Large Structures]]
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[[Category: Felts RL]]
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==Reference==
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[[Category: Reilly TJ]]
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<ref group="xtra">PMID:19836403</ref><references group="xtra"/>
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[[Category: Singh H]]
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[[Category: Acid phosphatase]]
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[[Category: Tanner JJ]]
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[[Category: Francisella tularensis subsp. holarctica lvs]]
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[[Category: Felts, R L.]]
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[[Category: Reilly,T J.]]
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[[Category: Singh, H.]]
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[[Category: Tanner, J J.]]
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[[Category: Hap]]
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[[Category: Histidine acid phosphatase]]
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[[Category: Hydrolase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 20 16:39:18 2010''
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Current revision

Crystal structure of ligand-free Francisella tularensis histidine acid phosphatase

PDB ID 3it2

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