3jxs

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:06, 6 September 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3jxs.png|left|200px]]
 
-
<!--
+
==Crystal structure of XG34, an evolved xyloglucan binding CBM==
-
The line below this paragraph, containing "STRUCTURE_3jxs", creates the "Structure Box" on the page.
+
<StructureSection load='3jxs' size='340' side='right'caption='[[3jxs]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3jxs]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodothermus_marinus Rhodothermus marinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JXS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JXS FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
{{STRUCTURE_3jxs| PDB=3jxs | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jxs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jxs OCA], [https://pdbe.org/3jxs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jxs RCSB], [https://www.ebi.ac.uk/pdbsum/3jxs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jxs ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of XG34, an evolved xyloglucan binding CBM===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q7WTN6_RHOMR Q7WTN6_RHOMR]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3JXS is a 3 chains structure with sequences from [http://en.wikipedia.org/wiki/Rhodothermus_marinus Rhodothermus marinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JXS OCA].
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==Reference==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jx/3jxs_consurf.spt"</scriptWhenChecked>
-
<ref group="xtra">PMID:19950365</ref><references group="xtra"/>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3jxs ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Rhodothermus marinus]]
[[Category: Rhodothermus marinus]]
-
[[Category: Brumer, H.]]
+
[[Category: Brumer H]]
-
[[Category: Divne, C.]]
+
[[Category: Divne C]]
-
[[Category: Gullfot, F.]]
+
[[Category: Gullfot F]]
-
[[Category: Tan, T C.]]
+
[[Category: Tan T-C]]
-
[[Category: Calcium binding]]
+
-
[[Category: Carbohydrate-binding domain]]
+
-
[[Category: Cbm]]
+
-
[[Category: Crystal structure]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Xylan degradation]]
+
-
[[Category: Xyloglucan binding]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 20 16:42:36 2010''
+

Current revision

Crystal structure of XG34, an evolved xyloglucan binding CBM

PDB ID 3jxs

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools