Template:STRUCTURE 1cdw
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1cdw]], [[Resolution|resolution]] 1.90Å (<scene name='initialview01'>default scene</scene>)}}} | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1cdw]], [[Resolution|resolution]] 1.90Å (<scene name='initialview01'>default scene</scene>)}}} | ||
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1cdw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cdw OCA], [http://www. | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1cdw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cdw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1cdw RCSB], [http://www.ebi.ac.uk/pdbsum/1cdw PDBsum]</span> |
|FUNCTION={{GO|id=GO:0016251 | text = general RNA polymerase II transcription factor activity}}{{GO|id=GO:0005488 | text = binding}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0003702 | text = RNA polymerase II transcription factor activity}} | |FUNCTION={{GO|id=GO:0016251 | text = general RNA polymerase II transcription factor activity}}{{GO|id=GO:0005488 | text = binding}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0003702 | text = RNA polymerase II transcription factor activity}} | ||
|PROCESS={{GO|id=GO:0006367 | text = transcription initiation from RNA polymerase II promoter}}{{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0008219 | text = cell death}}{{GO|id=GO:0006366 | text = transcription from RNA polymerase II promoter}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}} | |PROCESS={{GO|id=GO:0006367 | text = transcription initiation from RNA polymerase II promoter}}{{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0008219 | text = cell death}}{{GO|id=GO:0006366 | text = transcription from RNA polymerase II promoter}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}} | ||
|COMPONENT={{GO|id=GO:0005634 | text = nucleus}}{{GO|id=GO:0005669 | text = transcription factor TFIID complex}} | |COMPONENT={{GO|id=GO:0005634 | text = nucleus}}{{GO|id=GO:0005669 | text = transcription factor TFIID complex}} | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1cdwA02 1Cdwa02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1cdwA01 1Cdwa01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012295 Ipr012295], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012294 Ipr012294], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000814 Ipr000814]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00352 PF00352]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=41212 d1cdwa1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=41213 d1cdwa2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P20226 P20226]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1cdwA02 1Cdwa02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1cdwA01 1Cdwa01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012295 Ipr012295], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012294 Ipr012294], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000814 Ipr000814]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00352 PF00352]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=41212 d1cdwa1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=41213 d1cdwa2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P20226 P20226]</span> | ||
| - | |FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=TBP TBP]</span> | ||
|uPDB=1CDW|CONSURF={{!}}- | |uPDB=1CDW|CONSURF={{!}}- | ||
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| Line 16: | Line 15: | ||
<jmolButton> | <jmolButton> | ||
<script></script> | <script></script> | ||
| - | <text> | + | <text>B [x]</text> |
| - | <name> | + | <name>jmb_1cdw_B</name> |
| - | <title>toggle chain | + | <title>toggle chain B</title> |
<jsscript>ConsurfChainButton(elementClicked)</jsscript> | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
<appendtargetsuffixtoid>true</appendtargetsuffixtoid> | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| Line 27: | Line 26: | ||
<jmolButton> | <jmolButton> | ||
<script></script> | <script></script> | ||
| - | <text> | + | <text>C [x]</text> |
| - | <name> | + | <name>jmb_1cdw_C</name> |
| - | <title>toggle chain | + | <title>toggle chain C</title> |
<jsscript>ConsurfChainButton(elementClicked)</jsscript> | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
<appendtargetsuffixtoid>true</appendtargetsuffixtoid> | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| Line 38: | Line 37: | ||
<jmolButton> | <jmolButton> | ||
<script></script> | <script></script> | ||
| - | <text> | + | <text>A [x]</text> |
| - | <name> | + | <name>jmb_1cdw_A</name> |
| - | <title>toggle chain | + | <title>toggle chain A</title> |
<jsscript>ConsurfChainButton(elementClicked)</jsscript> | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
<appendtargetsuffixtoid>true</appendtargetsuffixtoid> | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
Current revision
| |||||||||
| 1cdw, resolution 1.90Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
