3jy6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:14, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3jy6.png|left|200px]]
 
-
<!--
+
==Crystal structure of LacI Transcriptional regulator from Lactobacillus brevis==
-
The line below this paragraph, containing "STRUCTURE_3jy6", creates the "Structure Box" on the page.
+
<StructureSection load='3jy6' size='340' side='right'caption='[[3jy6]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3jy6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Levilactobacillus_brevis_ATCC_367 Levilactobacillus brevis ATCC 367]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JY6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JY6 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.97&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
-
{{STRUCTURE_3jy6| PDB=3jy6 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jy6 OCA], [https://pdbe.org/3jy6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jy6 RCSB], [https://www.ebi.ac.uk/pdbsum/3jy6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jy6 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q03T70_LEVBA Q03T70_LEVBA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jy/3jy6_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3jy6 ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of LacI Transcriptional regulator from Lactobacillus brevis===
+
==See Also==
-
 
+
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3JY6 is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Lactobacillus_brevis_atcc_367 Lactobacillus brevis atcc 367]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JY6 OCA].
+
[[Category: Large Structures]]
-
[[Category: Lactobacillus brevis atcc 367]]
+
[[Category: Levilactobacillus brevis ATCC 367]]
-
[[Category: Burley, S K.]]
+
[[Category: Burley SK]]
-
[[Category: Ibrahim, B Syed.]]
+
[[Category: Kumaran D]]
-
[[Category: Kumaran, D.]]
+
[[Category: Swaminathan S]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
[[Category: Syed Ibrahim B]]
-
[[Category: Swaminathan, S.]]
+
-
[[Category: 11238g]]
+
-
[[Category: Crystal structure]]
+
-
[[Category: Dna-binding]]
+
-
[[Category: Lac i]]
+
-
[[Category: New york sgx research center for structural genomic]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-ii]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Transcription]]
+
-
[[Category: Transcription regulation]]
+
-
[[Category: Transcription regulator]]
+
-
[[Category: Transcriptional regulator]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jan 28 14:39:03 2010''
+

Current revision

Crystal structure of LacI Transcriptional regulator from Lactobacillus brevis

PDB ID 3jy6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools