3c6d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:33, 21 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3c6d.png|left|200px]]
 
-
<!--
+
==The pseudo-atomic structure of dengue immature virus==
-
The line below this paragraph, containing "STRUCTURE_3c6d", creates the "Structure Box" on the page.
+
<SX load='3c6d' size='340' side='right' viewer='molstar' caption='[[3c6d]], [[Resolution|resolution]] 12.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3c6d]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Dengue_virus_2 Dengue virus 2] and [https://en.wikipedia.org/wiki/Dengue_virus_2_Thailand/16681/84 Dengue virus 2 Thailand/16681/84]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C6D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C6D FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 12.5&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c6d OCA], [https://pdbe.org/3c6d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c6d RCSB], [https://www.ebi.ac.uk/pdbsum/3c6d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c6d ProSAT]</span></td></tr>
-
{{STRUCTURE_3c6d| PDB=3c6d | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===The pseudo-atomic structure of dengue immature virus===
+
[https://www.uniprot.org/uniprot/A7TUD3_9FLAV A7TUD3_9FLAV] Component of the viral RNA replication complex that functions in virion assembly and antagonizes the host immune response.[ARBA:ARBA00024317] Functions as a signal peptide for NS4B and is required for the interferon antagonism activity of the latter.[ARBA:ARBA00003504] Serine protease subunit NS2B: Required cofactor for the serine protease function of NS3.[PROSITE-ProRule:PRU00859]
-
 
+
__TOC__
-
 
+
</SX>
-
<!--
+
-
The line below this paragraph, {{ABSTRACT_PUBMED_18369147}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 18369147 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_18369147}}
+
-
 
+
-
==About this Structure==
+
-
3C6D is a 6 chains structure with sequences from [http://en.wikipedia.org/wiki/Dengue_virus_2 Dengue virus 2] and [http://en.wikipedia.org/wiki/Viruses Viruses]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C6D OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:18369147</ref><references group="xtra"/>
+
[[Category: Dengue virus 2]]
[[Category: Dengue virus 2]]
-
[[Category: Viruses]]
+
[[Category: Dengue virus 2 Thailand/16681/84]]
-
[[Category: Li, L.]]
+
[[Category: Large Structures]]
-
[[Category: Atp-binding]]
+
[[Category: Li L]]
-
[[Category: Capsid protein]]
+
-
[[Category: Cleavage on pair of basic residue]]
+
-
[[Category: Endoplasmic reticulum]]
+
-
[[Category: Envelope protein]]
+
-
[[Category: Glycoprotein]]
+
-
[[Category: Helicase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Icosahedral virion]]
+
-
[[Category: Icosahedral virus]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Multifunctional enzyme]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Nucleotidyltransferase]]
+
-
[[Category: Nucleus]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Protease]]
+
-
[[Category: Ribonucleoprotein]]
+
-
[[Category: Rna replication]]
+
-
[[Category: Rna-binding]]
+
-
[[Category: Rna-directed rna polymerase]]
+
-
[[Category: Secreted]]
+
-
[[Category: Serine protease]]
+
-
[[Category: Transcription]]
+
-
[[Category: Transcription regulation]]
+
-
[[Category: Transferase]]
+
-
[[Category: Transmembrane]]
+
-
[[Category: Viral nucleoprotein]]
+
-
[[Category: Virus]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 3 08:51:52 2010''
+

Current revision

The pseudo-atomic structure of dengue immature virus

3c6d, resolution 12.50Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools