2zw5

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{{Seed}}
 
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[[Image:2zw5.png|left|200px]]
 
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==Crystal structure of bleomycin N-acetyltransferase complexed with coenzyme A in the trigonal crystal==
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The line below this paragraph, containing "STRUCTURE_2zw5", creates the "Structure Box" on the page.
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<StructureSection load='2zw5' size='340' side='right'caption='[[2zw5]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2zw5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_verticillus Streptomyces verticillus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZW5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZW5 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene></td></tr>
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{{STRUCTURE_2zw5| PDB=2zw5 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zw5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zw5 OCA], [https://pdbe.org/2zw5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zw5 RCSB], [https://www.ebi.ac.uk/pdbsum/2zw5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zw5 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q53796_9ACTN Q53796_9ACTN]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zw/2zw5_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zw5 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Bleomycin (Bm) N-acetyltransferase, BAT, is a self-resistance determinant in Bm-producing Streptomyces verticillus ATCC15003. In our present study, we crystallized BAT under both a terrestrial and a microgravity environment in the International Space Station. In addition to substrate-free BAT, the crystal structures of BAT in a binary complex with CoA and in a ternary complex with Bm and CoA were determined. BAT forms a dimer structure via interaction of its C-terminal domains in the monomers. However, each N-terminal domain in the dimer is positioned without mutual interaction. The tunnel observed in the N-terminal domain of BAT has two entrances: one that adopts a wide funnel-like structure necessary to accommodate the metal-binding domain of Bm, and another narrow entrance that accommodates acetyl-CoA (AcCoA). A groove formed on the dimer interface of two BAT C-terminal domains accommodates the DNA-binding domain of Bm. In a ternary complex of BAT, BmA(2), and CoA, a thiol group of CoA is positioned near the primary amine of Bm at the midpoint of the tunnel. This proximity ensures efficient transfer of an acetyl group from AcCoA to the primary amine of Bm. Based on the BAT crystal structure and the enzymatic kinetic study, we propose that the catalytic mode of BAT takes an ordered-like mechanism.
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===Crystal structure of bleomycin N-acetyltransferase complexed with coenzyme A in the trigonal crystal===
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Catalytic mechanism of bleomycin N-acetyltransferase proposed on the basis of its crystal structure.,Oda K, Matoba Y, Noda M, Kumagai T, Sugiyama M J Biol Chem. 2010 Jan 8;285(2):1446-56. Epub 2009 Nov 3. PMID:19889644<ref>PMID:19889644</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_19889644}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2zw5" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 19889644 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_19889644}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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2ZW5 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Streptomyces_verticillus Streptomyces verticillus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZW5 OCA].
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==Reference==
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<ref group="xtra">PMID:19889644</ref><references group="xtra"/>
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[[Category: Streptomyces verticillus]]
[[Category: Streptomyces verticillus]]
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[[Category: Matoba, Y.]]
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[[Category: Matoba Y]]
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[[Category: Oda, K.]]
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[[Category: Oda K]]
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[[Category: Sugiyama, M.]]
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[[Category: Sugiyama M]]
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[[Category: Dimer]]
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[[Category: Transferase]]
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[[Category: Two domain]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 3 08:53:42 2010''
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Current revision

Crystal structure of bleomycin N-acetyltransferase complexed with coenzyme A in the trigonal crystal

PDB ID 2zw5

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