3l82

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{{Seed}}
 
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[[Image:3l82.jpg|left|200px]]
 
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==X-ray Crystal structure of TRF1 and Fbx4 complex==
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The line below this paragraph, containing "STRUCTURE_3l82", creates the "Structure Box" on the page.
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<StructureSection load='3l82' size='340' side='right'caption='[[3l82]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3l82]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L82 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3L82 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_3l82| PDB=3l82 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3l82 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l82 OCA], [https://pdbe.org/3l82 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3l82 RCSB], [https://www.ebi.ac.uk/pdbsum/3l82 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3l82 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TERF1_HUMAN TERF1_HUMAN] Binds the telomeric double-stranded TTAGGG repeat and negatively regulates telomere length. Involved in the regulation of the mitotic spindle. Component of the shelterin complex (telosome) that is involved in the regulation of telomere length and protection. Shelterin associates with arrays of double-stranded TTAGGG repeats added by telomerase and protects chromosome ends; without its protective activity, telomeres are no longer hidden from the DNA damage surveillance and chromosome ends are inappropriately processed by DNA repair pathways.<ref>PMID:16166375</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l8/3l82_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3l82 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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TRF1 is a critical regulator of telomere length. As such, TRF1 levels are regulated by ubiquitin-dependent proteolysis via an SCF E3 ligase where Fbx4 contributes to substrate specification. Here, we report the crystal structure of the Fbx4-TRF1 complex at 2.4 A resolution. Fbx4 contains an unusual substrate-binding domain that adopts a small GTPase fold. Strikingly, this atypical GTPase domain of Fbx4 binds to a globular domain of TRF1 through an intermolecular beta sheet, instead of recognizing short peptides/degrons as often seen in other F-box protein-substrate complexes. Importantly, mutations in this interface abrogate Fbx4-dependent TRF1 binding and ubiquitination. Furthermore, the data demonstrate that recognition of TRF1 by SCF(Fbx4) is regulated by another telomere protein, TIN2. Our results reveal an atypical small GTPase domain within Fbx4 as a substrate-binding motif for SCF(Fbx4) and uncover a mechanism for selective ubiquitination and degradation of TRF1 in telomere homeostasis control.
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===X-ray Crystal structure of TRF1 and Fbx4 complex===
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Structural basis of selective ubiquitination of TRF1 by SCFFbx4.,Zeng Z, Wang W, Yang Y, Chen Y, Yang X, Diehl JA, Liu X, Lei M Dev Cell. 2010 Feb 16;18(2):214-25. PMID:20159592<ref>PMID:20159592</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_20159592}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 3l82" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 20159592 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_20159592}}
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__TOC__
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</StructureSection>
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==About this Structure==
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3L82 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L82 OCA].
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==Reference==
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<ref group="xtra">PMID:20159592</ref><references group="xtra"/>
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Chen, Y.]]
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[[Category: Large Structures]]
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[[Category: Diehl, J A.]]
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[[Category: Chen Y]]
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[[Category: Lei, M.]]
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[[Category: Diehl JA]]
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[[Category: Liu, X D.]]
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[[Category: Lei M]]
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[[Category: Wang, W.]]
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[[Category: Liu XD]]
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[[Category: Yang, X M.]]
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[[Category: Wang W]]
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[[Category: Yang, Y T.]]
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[[Category: Yang XM]]
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[[Category: Zeng, Z X.]]
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[[Category: Yang YT]]
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[[Category: Acetylation]]
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[[Category: Zeng ZX]]
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[[Category: Adp-ribosylation]]
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[[Category: Alternative splicing]]
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[[Category: Cell cycle]]
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[[Category: Cell division]]
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[[Category: Chromosomal protein]]
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[[Category: Cytoplasm]]
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[[Category: Cytoskeleton]]
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[[Category: Dna-binding]]
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[[Category: Gtpase domain]]
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[[Category: Helix]]
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[[Category: Mitosis]]
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[[Category: Nucleus]]
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[[Category: Phosphoprotein]]
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[[Category: Telomere]]
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[[Category: Trfh domain]]
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[[Category: Ubl conjugation pathway]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 10 13:46:43 2010''
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Current revision

X-ray Crystal structure of TRF1 and Fbx4 complex

PDB ID 3l82

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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