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3k6t

From Proteopedia

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{{Seed}}
 
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[[Image:3k6t.jpg|left|200px]]
 
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==Crystal structure of the GLD-1 homodimerization domain from Caenorhabditis elegans at 2.04 A resolution==
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The line below this paragraph, containing "STRUCTURE_3k6t", creates the "Structure Box" on the page.
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<StructureSection load='3k6t' size='340' side='right'caption='[[3k6t]], [[Resolution|resolution]] 2.04&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3k6t]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K6T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K6T FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.04&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k6t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k6t OCA], [https://pdbe.org/3k6t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k6t RCSB], [https://www.ebi.ac.uk/pdbsum/3k6t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k6t ProSAT]</span></td></tr>
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{{STRUCTURE_3k6t| PDB=3k6t | SCENE= }}
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</table>
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== Function ==
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===Crystal structure of the GLD-1 homodimerization domain from Caenorhabditis elegans at 2.04 A resolution===
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[https://www.uniprot.org/uniprot/GLD1_CAEEL GLD1_CAEEL] Germ line-specific tumor suppressor essential for oogenesis. Controls the spatial pattern of translation of multiple oogenesis specific mRNAs (e.g. yolk receptor rme-2) by repression of translation during early meiotic prophase (leptotene to pachytene) and then derepression of translation during diplotene/ diakinesis, following its degradation. Also functions to promote the male sexual fate in the hermaphrodite germline but not the male germline. Functions redundantly with gld-2 to promote the initiation of meiotic development and/or inhibit stem cell proliferation.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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3K6T is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K6T OCA].
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k6/3k6t_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k6t ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Caenorhabditis elegans]]
[[Category: Caenorhabditis elegans]]
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[[Category: Beuck, C.]]
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[[Category: Large Structures]]
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[[Category: Carmel, A B.]]
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[[Category: Beuck C]]
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[[Category: Columbus, L.]]
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[[Category: Carmel AB]]
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[[Category: Kerkow, D E.]]
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[[Category: Columbus L]]
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[[Category: Stanfield, R L.]]
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[[Category: Kerkow DE]]
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[[Category: Szymczyna, B R.]]
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[[Category: Stanfield RL]]
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[[Category: Williamson, J R.]]
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[[Category: Szymczyna BR]]
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[[Category: Developmental protein]]
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[[Category: Williamson JR]]
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[[Category: Differentiation]]
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[[Category: Gld-1]]
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[[Category: Helix-turn-helix motif]]
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[[Category: Hydrophobic homodimer interface]]
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[[Category: Meiosis]]
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[[Category: Oogenesis]]
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[[Category: Perpendicular stacking of protomer]]
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[[Category: Protein binding]]
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[[Category: Qua1 homodimerization domain]]
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[[Category: Rna-binding]]
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[[Category: Translation regulation]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 10 14:36:32 2010''
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Current revision

Crystal structure of the GLD-1 homodimerization domain from Caenorhabditis elegans at 2.04 A resolution

PDB ID 3k6t

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