3lbx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:19, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3lbx.jpg|left|200px]]
 
-
<!--
+
==Crystal Structure of the Erythrocyte Spectrin Tetramerization Domain Complex==
-
The line below this paragraph, containing "STRUCTURE_3lbx", creates the "Structure Box" on the page.
+
<StructureSection load='3lbx' size='340' side='right'caption='[[3lbx]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3lbx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LBX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LBX FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lbx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lbx OCA], [https://pdbe.org/3lbx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lbx RCSB], [https://www.ebi.ac.uk/pdbsum/3lbx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lbx ProSAT]</span></td></tr>
-
{{STRUCTURE_3lbx| PDB=3lbx | SCENE= }}
+
</table>
 +
== Disease ==
 +
[https://www.uniprot.org/uniprot/SPTA1_HUMAN SPTA1_HUMAN] Defects in SPTA1 are the cause of elliptocytosis type 2 (EL2) [MIM:[https://omim.org/entry/130600 130600]. EL2 is a Rhesus-unlinked form of hereditary elliptocytosis, a genetically heterogeneous, autosomal dominant hematologic disorder. It is characterized by variable hemolytic anemia and elliptical or oval red cell shape.<ref>PMID:2794061</ref> <ref>PMID:8018926</ref> <ref>PMID:1679439</ref> <ref>PMID:1878597</ref> <ref>PMID:2568862</ref> <ref>PMID:1541680</ref> <ref>PMID:8364215</ref> <ref>PMID:2384601</ref> <ref>PMID:1638030</ref> <ref>PMID:2568861</ref> <ref>PMID:8193371</ref> <ref>PMID:7772539</ref> Defects in SPTA1 are a cause of hereditary pyropoikilocytosis (HPP) [MIM:[https://omim.org/entry/266140 266140]. HPP is an autosomal recessive disorder characterized by hemolytic anemia, microspherocytosis, poikilocytosis, and an unusual thermal sensitivity of red cells.<ref>PMID:1878597</ref> Defects in SPTA1 are the cause of spherocytosis type 3 (SPH3) [MIM:[https://omim.org/entry/270970 270970]; also known as hereditary spherocytosis type 3 (HS3). Spherocytosis is a hematologic disorder leading to chronic hemolytic anemia and characterized by numerous abnormally shaped erythrocytes which are generally spheroidal. SPH3 is characterized by severe hemolytic anemia. Inheritance is autosomal recessive.
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SPTA1_HUMAN SPTA1_HUMAN] Spectrin is the major constituent of the cytoskeletal network underlying the erythrocyte plasma membrane. It associates with band 4.1 and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lb/3lbx_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lbx ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of the Erythrocyte Spectrin Tetramerization Domain Complex===
+
==See Also==
-
 
+
*[[Spectrin|Spectrin]]
-
 
+
*[[Spectrin 3D structures|Spectrin 3D structures]]
-
==About this Structure==
+
== References ==
-
3LBX is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LBX OCA].
+
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Harper, S L.]]
+
[[Category: Large Structures]]
-
[[Category: Ipsaro, J J.]]
+
[[Category: Harper SL]]
-
[[Category: Marmorstein, R.]]
+
[[Category: Ipsaro JJ]]
-
[[Category: Messick, T E.]]
+
[[Category: Marmorstein R]]
-
[[Category: Mondragon, A.]]
+
[[Category: Messick TE]]
-
[[Category: Speicher, D W.]]
+
[[Category: Mondragon A]]
-
[[Category: Actin capping]]
+
[[Category: Speicher DW]]
-
[[Category: Actin-binding]]
+
-
[[Category: Alpha helix]]
+
-
[[Category: Alternative splicing]]
+
-
[[Category: Calcium]]
+
-
[[Category: Cell shape]]
+
-
[[Category: Complex]]
+
-
[[Category: Cytoplasm]]
+
-
[[Category: Cytoskeleton]]
+
-
[[Category: Disease mutation]]
+
-
[[Category: Elliptocytosis]]
+
-
[[Category: Helical linker]]
+
-
[[Category: Hereditary hemolytic anemia]]
+
-
[[Category: Partial repeat]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Polymorphism]]
+
-
[[Category: Pyropoikilocytosis]]
+
-
[[Category: Sh3 domain]]
+
-
[[Category: Spectrin]]
+
-
[[Category: Structural protein]]
+
-
[[Category: Tetramer]]
+
-
[[Category: Three-helix bundle]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 10 14:43:41 2010''
+

Current revision

Crystal Structure of the Erythrocyte Spectrin Tetramerization Domain Complex

PDB ID 3lbx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools