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3lv4

From Proteopedia

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{{Seed}}
 
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[[Image:3lv4.jpg|left|200px]]
 
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==Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.==
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The line below this paragraph, containing "STRUCTURE_3lv4", creates the "Structure Box" on the page.
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<StructureSection load='3lv4' size='340' side='right' caption='[[3lv4]], [[Resolution|resolution]] 1.69&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3lv4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacld Bacld]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LV4 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_3lv4| PDB=3lv4 | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BL00219, BLi04220, yxiA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=279010 BACLD])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lv4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lv4 OCA], [http://pdbe.org/3lv4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lv4 RCSB], [http://www.ebi.ac.uk/pdbsum/3lv4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lv4 ProSAT]</span></td></tr>
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===Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.===
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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3LV4 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Bacillus_licheniformis Bacillus licheniformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV4 OCA].
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<jmolCheckbox>
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[[Category: Bacillus licheniformis]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lv/3lv4_consurf.spt"</scriptWhenChecked>
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[[Category: Abashidze, M.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Acton, T B.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Belote, RL.]]
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</jmolCheckbox>
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[[Category: Ciccosanti, C.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lv4 ConSurf].
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[[Category: Everett, J K.]]
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<div style="clear:both"></div>
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[[Category: Hunt, J F.]]
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__TOC__
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[[Category: Montelione, G T.]]
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</StructureSection>
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Bacld]]
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[[Category: Sahdev, S.]]
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[[Category: Abashidze, M]]
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[[Category: Seetharaman, J.]]
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[[Category: Acton, T B]]
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[[Category: Tong, L.]]
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[[Category: Belote, R L]]
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[[Category: Vorobiev, S.]]
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[[Category: Ciccosanti, C]]
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[[Category: Xiao, R.]]
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[[Category: Everett, J K]]
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[[Category: Hunt, J F]]
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[[Category: Montelione, G T]]
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[[Category: Structural genomic]]
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[[Category: Sahdev, S]]
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[[Category: Seetharaman, J]]
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[[Category: Tong, L]]
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[[Category: Vorobiev, S]]
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[[Category: Xiao, R]]
[[Category: 5-alpha-l-arabinosidase]]
[[Category: 5-alpha-l-arabinosidase]]
[[Category: Glycoside hydrolase]]
[[Category: Glycoside hydrolase]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Nesg]]
[[Category: Nesg]]
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[[Category: Northeast structural genomics consortium]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Similar to arabinan endo-1]]
[[Category: Similar to arabinan endo-1]]
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[[Category: Structural genomic]]
 
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 10 14:51:28 2010''
 

Current revision

Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.

3lv4, resolution 1.69Å

Drag the structure with the mouse to rotate

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OCA

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