2x1z

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{{Seed}}
 
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[[Image:2x1z.png|left|200px]]
 
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==Structure of Peridinin-Chlorophyll-Protein reconstituted with Chl-d==
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The line below this paragraph, containing "STRUCTURE_2x1z", creates the "Structure Box" on the page.
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<StructureSection load='2x1z' size='340' side='right'caption='[[2x1z]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2x1z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Amphidinium_carterae Amphidinium carterae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X1Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2X1Z FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CL7:CHLOROPHYLL+D'>CL7</scene>, <scene name='pdbligand=DGD:DIGALACTOSYL+DIACYL+GLYCEROL+(DGDG)'>DGD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PID:PERIDININ'>PID</scene></td></tr>
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{{STRUCTURE_2x1z| PDB=2x1z | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2x1z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x1z OCA], [https://pdbe.org/2x1z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2x1z RCSB], [https://www.ebi.ac.uk/pdbsum/2x1z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2x1z ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PCP1_AMPCA PCP1_AMPCA] Water-soluble antenna for capture of solar energy in the blue-green range. Peridinin is an asymmetric carotenoid.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x1/2x1z_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2x1z ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The peridinin-chlorophyll a-protein (PCP) from dinoflagellates is a soluble light harvesting antenna which gathers incoming photons mainly by the carotenoid peridinin. In PCPs reconstituted with different chlorophylls, the peridinin to chlorophyll energy transfer rates are well predicted by a Forster-like theory, but only if the pigment arrangements are identical in all PCPs. We have determined the X-ray structures of PCPs reconstituted with Chlorophyll-b (Chl-b), Chlorophyll-d (Chl-d) and Bacteriochlorophyll-a (BChl-a) to resolutions&lt;or=2A. In all three cases the pigment arrangements are essentially the same as in native PCP. Hydrogen bonding is not responsible for preferential incorporation of "non-native" chlorophylls over Chl-a.
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===STRUCTURE OF PERIDININ-CHLOROPHYLL-PROTEIN RECONSTITUTED WITH CHL-D===
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X-ray structures of the peridinin-chlorophyll-protein reconstituted with different chlorophylls.,Schulte T, Hiller RG, Hofmann E FEBS Lett. 2010 Mar 5;584(5):973-8. Epub 2010 Jan 25. PMID:20102711<ref>PMID:20102711</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_20102711}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2x1z" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 20102711 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_20102711}}
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__TOC__
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</StructureSection>
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==About this Structure==
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2X1Z is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Amphidinium_carterae Amphidinium carterae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X1Z OCA].
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==Reference==
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<ref group="xtra">PMID:20102711</ref><references group="xtra"/>
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[[Category: Amphidinium carterae]]
[[Category: Amphidinium carterae]]
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[[Category: Hiller, R G.]]
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[[Category: Large Structures]]
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[[Category: Hofmann, E.]]
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[[Category: Hiller RG]]
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[[Category: Schulte, T.]]
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[[Category: Hofmann E]]
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[[Category: Alpha helical]]
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[[Category: Schulte T]]
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[[Category: Carotenoid]]
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[[Category: Chloroplast]]
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[[Category: Chromophore]]
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[[Category: Light harvesting protein]]
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[[Category: Light-harvesting polypeptide]]
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[[Category: Photosynthesis]]
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[[Category: Transit peptide]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 10 15:00:14 2010''
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Current revision

Structure of Peridinin-Chlorophyll-Protein reconstituted with Chl-d

PDB ID 2x1z

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