3fdj

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{{Seed}}
 
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[[Image:3fdj.png|left|200px]]
 
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==The structure of a DegV family protein from Eubacterium eligens.==
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The line below this paragraph, containing "STRUCTURE_3fdj", creates the "Structure Box" on the page.
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<StructureSection load='3fdj' size='340' side='right'caption='[[3fdj]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3fdj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lachnospira_eligens Lachnospira eligens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FDJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FDJ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
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{{STRUCTURE_3fdj| PDB=3fdj | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fdj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fdj OCA], [https://pdbe.org/3fdj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fdj RCSB], [https://www.ebi.ac.uk/pdbsum/3fdj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fdj ProSAT], [https://www.topsan.org/Proteins/MCSG/3fdj TOPSAN]</span></td></tr>
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</table>
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===The structure of a DegV family protein from Eubacterium eligens.===
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== Function ==
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[https://www.uniprot.org/uniprot/D0VX07_9FIRM D0VX07_9FIRM] May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.[ARBA:ARBA00003238]
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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3FDJ is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Eubacterium_eligens Eubacterium eligens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FDJ OCA].
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Check<jmol>
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[[Category: Eubacterium eligens]]
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<jmolCheckbox>
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[[Category: Cuff, M E.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/3fdj_consurf.spt"</scriptWhenChecked>
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[[Category: Freeman, L.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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[[Category: Hendricks, R.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Joachimiak, A.]]
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</jmolCheckbox>
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[[Category: MCSG, Midwest Center for Structural Genomics.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fdj ConSurf].
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[[Category: Degv]]
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<div style="clear:both"></div>
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[[Category: Gut microbiome]]
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__TOC__
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[[Category: Mcsg]]
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</StructureSection>
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[[Category: Midwest center for structural genomic]]
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[[Category: Lachnospira eligens]]
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[[Category: Protein structure initiative]]
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[[Category: Large Structures]]
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[[Category: Psi-2]]
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[[Category: Cuff ME]]
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[[Category: Structural genomic]]
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[[Category: Freeman L]]
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[[Category: Unknown function]]
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[[Category: Hendricks R]]
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[[Category: Joachimiak A]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 10 15:12:09 2010''
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Current revision

The structure of a DegV family protein from Eubacterium eligens.

PDB ID 3fdj

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