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User:Frieda Reichsman/Sandbox 1

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< User:Frieda Reichsman(Difference between revisions)
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Current revision (12:19, 29 September 2020) (edit) (undo)
 
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<applet load='1FSR' size='300' frame='true' align='right' caption='Insert caption here' />
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<StructureSection load='1uwx' size='300' side='right' scene='38/389917/Openingview_with_surface/1' caption='Protein G. But not a G protein... Really? ([[1uwx]])'>
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*This is my <scene name='User:Frieda_S._Reichsman/Sandbox_1/Scene1/1'>Scene 1/1</scene>. Both transitions enabled (default state).
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*This is my <scene name='User:Frieda_S._Reichsman/Sandbox_1/Scene1/2'>Scene 1/2</scene>. Skips the zoom out.
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*This is my <scene name='User:Frieda_S._Reichsman/Sandbox_1/Scene1/3'>Scene 1/3</scene>. Skips the zoom out and the "transition", i.e., the moveto.
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<applet load='1FSR' size='300' frame='true' align='right' caption='Insert caption here' scene='User:Frieda_S._Reichsman/Sandbox_1/Scene1/1' />
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<scene name='38/389917/Openingview_with_surface/1'>Opening view with surface</scene>
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<jmol>
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<jmolButton>
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<script>select protein; cpk;</script>
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<text>Spacefill</text>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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<script> var a = [10,20,30,40,50,60,70,80,90,100]; for(var i IN a) {select backbone; spacefill @i%; delay 0.1;}
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</script>
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<text>Fade in backbone atoms</text>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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<script> var a = [10,20,30,40,50,60,70,80,90,100]; for(var i IN a) {select sidechain; spacefill @i%; delay 0.1;}
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</script>
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<text>Spacefill fade in sidechain atoms</text>
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</jmolButton>
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</jmol>
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===Surface fade code-in-page versions===
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While not templates, carry out similar functions as the `Surface Fade` templates and may be useful for further development or as examples of using Jmol coding in Proteopedia pages.
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<jmol>
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<jmolLink>
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<script> var a = [1,2,3,4,5,6,7,8]; for(var i IN a) {isosurface translucent @i; delay 0.4;}
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</script>
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<text>Fade surface to invisible</text>
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</jmolLink>
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</jmol> (basic)
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<jmol>
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<jmolLink>
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<script> set ribbonborder on; set antialiasdisplay on; var a = [1,2,3,4,5,6,7,8]; for(var i IN a) {isosurface translucent @i; delay 0.4;}
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</script>
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<text>Fade surface to invisible</text>
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</jmolLink>
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</jmol> (with fancy cartoons)
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<jmol>
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<jmolLink>
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<script> var a = [8,7,6,5,4,3,2,1,0]; for(var i IN a) {isosurface translucent @i; delay 0.4;}
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</script>
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<text>Fade back to surface opaque</text>
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</jmolLink>
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</jmol>
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<scene name='38/389917/Openingview02/1'>Reset opening view</scene>

Current revision

Protein G. But not a G protein... Really? (1uwx)

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

Frieda Reichsman, Jaime Prilusky

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