This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2wly

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:01, 13 December 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2wly.jpg|left|200px]]
 
-
<!--
+
==Chitinase A from Serratia marcescens ATCC990 in complex with Chitotrio-thiazoline.==
-
The line below this paragraph, containing "STRUCTURE_2wly", creates the "Structure Box" on the page.
+
<StructureSection load='2wly' size='340' side='right'caption='[[2wly]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2wly]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Serratia_marcescens Serratia marcescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WLY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WLY FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene>, <scene name='pdbligand=NGT:3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL'>NGT</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SN5:2-DEOXY-2-(ETHANETHIOYLAMINO)-BETA-D-GLUCOPYRANOSE'>SN5</scene></td></tr>
-
{{STRUCTURE_2wly| PDB=2wly | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wly FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wly OCA], [https://pdbe.org/2wly PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wly RCSB], [https://www.ebi.ac.uk/pdbsum/2wly PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wly ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CHIA_SERMA CHIA_SERMA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wl/2wly_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wly ConSurf].
 +
<div style="clear:both"></div>
-
===CHITINASE A FROM SERRATIA MARCESCENS ATCC990 IN COMPLEX WITH CHITOTRIO-THIAZOLINE.===
+
==See Also==
-
 
+
*[[Chitinase 3D structures|Chitinase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2WLY is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WLY OCA].
+
[[Category: Large Structures]]
-
 
+
[[Category: Serratia marcescens]]
-
==Reference==
+
[[Category: Davies GJ]]
-
<ref group="xtra">PMID:20209544</ref><references group="xtra"/>
+
[[Category: Dennis RJ]]
-
[[Category: Chitinase]]
+
[[Category: Knapp S]]
-
[[Category: Davies, G J.]]
+
[[Category: Macdonald JM]]
-
[[Category: Dennis, R J.]]
+
[[Category: Tarling CA]]
-
[[Category: Knapp, S.]]
+
[[Category: Taylor EJ]]
-
[[Category: Macdonald, J M.]]
+
[[Category: Withers SG]]
-
[[Category: Tarling, C A.]]
+
-
[[Category: Taylor, E J.]]
+
-
[[Category: Withers, S G.]]
+
-
[[Category: Carbohydrate metabolism]]
+
-
[[Category: Chitin degradation]]
+
-
[[Category: Chitin hydrolysis]]
+
-
[[Category: Chitinase some]]
+
-
[[Category: Family 18 chitinase]]
+
-
[[Category: Glycosidase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Polysaccharide degradation]]
+
-
[[Category: Thiazoline]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 17 09:26:04 2010''
+

Current revision

Chitinase A from Serratia marcescens ATCC990 in complex with Chitotrio-thiazoline.

PDB ID 2wly

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools