3gix

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:06, 6 September 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3gix.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of human splicing factor dim2==
-
The line below this paragraph, containing "STRUCTURE_3gix", creates the "Structure Box" on the page.
+
<StructureSection load='3gix' size='340' side='right'caption='[[3gix]], [[Resolution|resolution]] 1.33&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3gix]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GIX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GIX FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.33&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900003:sucrose'>PRD_900003</scene></td></tr>
-
{{STRUCTURE_3gix| PDB=3gix | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gix FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gix OCA], [https://pdbe.org/3gix PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gix RCSB], [https://www.ebi.ac.uk/pdbsum/3gix PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gix ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of human splicing factor dim2===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/TXN4B_HUMAN TXN4B_HUMAN] Essential role in pre-mRNA splicing. Required in cell cycle progression for S/G(2) transition.<ref>PMID:15161931</ref>
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3GIX is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GIX OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gi/3gix_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gix ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Guo, F.]]
+
[[Category: Large Structures]]
-
[[Category: Jin, T C.]]
+
[[Category: Guo F]]
-
[[Category: Zhang, Y Z.]]
+
[[Category: Jin TC]]
-
[[Category: Cell cycle]]
+
[[Category: Zhang YZ]]
-
[[Category: Dlp]]
+
-
[[Category: Mrna processing]]
+
-
[[Category: Mrna splicing]]
+
-
[[Category: Nucleus]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Pre-mrna splicing]]
+
-
[[Category: Splicing]]
+
-
[[Category: Txnl4b]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 17 09:40:08 2010''
+

Current revision

Crystal structure of human splicing factor dim2

PDB ID 3gix

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools