3lp5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:21, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3lp5.jpg|left|200px]]
 
-
<!--
+
==The crystal structure of the putative cell surface hydrolase from Lactobacillus plantarum WCFS1==
-
The line below this paragraph, containing "STRUCTURE_3lp5", creates the "Structure Box" on the page.
+
<StructureSection load='3lp5' size='340' side='right'caption='[[3lp5]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3lp5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactiplantibacillus_plantarum Lactiplantibacillus plantarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LP5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LP5 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
{{STRUCTURE_3lp5| PDB=3lp5 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lp5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lp5 OCA], [https://pdbe.org/3lp5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lp5 RCSB], [https://www.ebi.ac.uk/pdbsum/3lp5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lp5 ProSAT]</span></td></tr>
-
 
+
</table>
-
===The crystal structure of the putative cell surface hydrolase from Lactobacillus plantarum WCFS1===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/F9UMW5_LACPL F9UMW5_LACPL]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3LP5 is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_plantarum Lactobacillus plantarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LP5 OCA].
+
Check<jmol>
-
[[Category: Lactobacillus plantarum]]
+
<jmolCheckbox>
-
[[Category: Cobb, G.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lp/3lp5_consurf.spt"</scriptWhenChecked>
-
[[Category: Joachimiak, A.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Li, H.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmolCheckbox>
-
[[Category: Zhang, R.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lp5 ConSurf].
-
[[Category: Hydrolase]]
+
<div style="clear:both"></div>
-
[[Category: Lactobacillus plantarum]]
+
__TOC__
-
[[Category: Mcsg]]
+
</StructureSection>
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Lactiplantibacillus plantarum]]
-
[[Category: Protein structure initiative]]
+
[[Category: Large Structures]]
-
[[Category: Psi2]]
+
[[Category: Cobb G]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Surface hydrolase]]
+
[[Category: Li H]]
-
 
+
[[Category: Zhang R]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 17 09:46:06 2010''
+

Current revision

The crystal structure of the putative cell surface hydrolase from Lactobacillus plantarum WCFS1

PDB ID 3lp5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools