This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3k6w

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:15, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3k6w.png|left|200px]]
 
-
<!--
+
==Apo and ligand bound structures of ModA from the archaeon Methanosarcina acetivorans==
-
The line below this paragraph, containing "STRUCTURE_3k6w", creates the "Structure Box" on the page.
+
<StructureSection load='3k6w' size='340' side='right'caption='[[3k6w]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3k6w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanosarcina_acetivorans Methanosarcina acetivorans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K6W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K6W FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MOO:MOLYBDATE+ION'>MOO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3k6w| PDB=3k6w | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k6w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k6w OCA], [https://pdbe.org/3k6w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k6w RCSB], [https://www.ebi.ac.uk/pdbsum/3k6w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k6w ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Y280_METAC Y280_METAC]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k6/3k6w_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k6w ConSurf].
 +
<div style="clear:both"></div>
-
===Apo and ligand bound structures of ModA from the archaeon Methanosarcina acetivorans===
+
==See Also==
-
 
+
*[[ABC transporter 3D structures|ABC transporter 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_20208152}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 20208152 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_20208152}}
+
-
 
+
-
==About this Structure==
+
-
3K6W is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanosarcina_acetivorans Methanosarcina acetivorans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K6W OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:20208152</ref><references group="xtra"/>
+
[[Category: Methanosarcina acetivorans]]
[[Category: Methanosarcina acetivorans]]
-
[[Category: Arbing, M A.]]
+
[[Category: Arbing MA]]
-
[[Category: Chan, S.]]
+
[[Category: Chan S]]
-
[[Category: Chernishof, I.]]
+
[[Category: Chernishof I]]
-
[[Category: Chiang, J.]]
+
[[Category: Chiang J]]
-
[[Category: Giuroiu, I.]]
+
[[Category: Giuroiu I]]
-
[[Category: Gunsalus, R P.]]
+
[[Category: Gunsalus RP]]
-
[[Category: Perry, L J.]]
+
[[Category: Perry LJ]]
-
[[Category: Sawaya, M R.]]
+
[[Category: Sawaya MR]]
-
[[Category: Abc transporter]]
+
-
[[Category: Ligand]]
+
-
[[Category: Metal-binding protein]]
+
-
[[Category: Methanosarcina acetivoran]]
+
-
[[Category: Moda]]
+
-
[[Category: Molybdate]]
+
-
[[Category: Periplasmic binding protein]]
+
-
[[Category: Transport protein]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 24 08:26:17 2010''
+

Current revision

Apo and ligand bound structures of ModA from the archaeon Methanosarcina acetivorans

PDB ID 3k6w

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3k6w"
Personal tools