3m4p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:48, 6 September 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3m4p.jpg|left|200px]]
 
-
<!--
+
==Entamoeba histolytica asparaginyl-tRNA synthetase (AsnRS) in complex with asparaginyl-adenylate==
-
The line below this paragraph, containing "STRUCTURE_3m4p", creates the "Structure Box" on the page.
+
<StructureSection load='3m4p' size='340' side='right'caption='[[3m4p]], [[Resolution|resolution]] 2.83&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3m4p]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Entamoeba_histolytica Entamoeba histolytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M4P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3M4P FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.83&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4AD:4-AMINO-1,4-DIOXOBUTAN-2-AMINIUM+ADENOSINE-5-MONOPHOSPHATE'>4AD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3m4p| PDB=3m4p | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3m4p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m4p OCA], [https://pdbe.org/3m4p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3m4p RCSB], [https://www.ebi.ac.uk/pdbsum/3m4p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3m4p ProSAT]</span></td></tr>
-
 
+
</table>
-
===Entamoeba histolytica asparaginyl-tRNA synthetase (AsnRS) in complex with asparaginyl-adenylate===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/C4LWW8_ENTH1 C4LWW8_ENTH1]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3M4P is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Entamoeba_histolytica Entamoeba histolytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M4P OCA].
+
Check<jmol>
-
[[Category: Asparagine--tRNA ligase]]
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m4/3m4p_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3m4p ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Entamoeba histolytica]]
[[Category: Entamoeba histolytica]]
-
[[Category: Larson, E T.]]
+
[[Category: Large Structures]]
-
[[Category: MSGPP, Medical Structural Genomics of Pathogenic Protozoa.]]
+
[[Category: Larson ET]]
-
[[Category: Merritt, E A.]]
+
[[Category: Merritt EA]]
-
[[Category: Aar]]
+
-
[[Category: Aminoacyl-trna synthetase]]
+
-
[[Category: Asnr]]
+
-
[[Category: Atp-binding]]
+
-
[[Category: Ligase]]
+
-
[[Category: Medical structural genomics of pathogenic protozoa]]
+
-
[[Category: Msgpp]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Protein biosynthesis]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Translation]]
+
-
[[Category: Trna ligase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 24 09:09:13 2010''
+

Current revision

Entamoeba histolytica asparaginyl-tRNA synthetase (AsnRS) in complex with asparaginyl-adenylate

PDB ID 3m4p

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3m4p"
Personal tools