3iyi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:07, 21 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3iyi.jpg|left|200px]]
 
-
<!--
+
==P22 expanded head coat protein structures reveal a novel mechanism for capsid maturation: Stability without auxiliary proteins or chemical cross-links==
-
The line below this paragraph, containing "STRUCTURE_3iyi", creates the "Structure Box" on the page.
+
<SX load='3iyi' size='340' side='right' viewer='molstar' caption='[[3iyi]], [[Resolution|resolution]] 9.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3iyi]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_virus_P22 Salmonella virus P22]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IYI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IYI FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 9.1&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iyi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iyi OCA], [https://pdbe.org/3iyi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iyi RCSB], [https://www.ebi.ac.uk/pdbsum/3iyi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iyi ProSAT]</span></td></tr>
-
{{STRUCTURE_3iyi| PDB=3iyi | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===P22 expanded head coat protein structures reveal a novel mechanism for capsid maturation: Stability without auxiliary proteins or chemical cross-links===
+
[https://www.uniprot.org/uniprot/CAPSD_BPP22 CAPSD_BPP22] Assembles to form an icosahedral capsid with a T=7 symmetry.
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_20223221}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 20223221 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iy/3iyi_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_20223221}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iyi ConSurf].
-
3IYI is a 7 chains structure with sequences from [http://en.wikipedia.org/wiki/Enterobacteria_phage_p22 Enterobacteria phage p22]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IYI OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</SX>
-
<ref group="xtra">PMID:20223221</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Enterobacteria phage p22]]
+
[[Category: Salmonella virus P22]]
-
[[Category: Baker, T S.]]
+
[[Category: Baker TS]]
-
[[Category: Cortines, J R.]]
+
[[Category: Cortines JR]]
-
[[Category: Johnson, J E.]]
+
[[Category: Johnson JE]]
-
[[Category: Khayat, R.]]
+
[[Category: Khayat R]]
-
[[Category: Parent, K N.]]
+
[[Category: Parent KN]]
-
[[Category: Suhanovsky, M M.]]
+
[[Category: Suhanovsky MM]]
-
[[Category: Teschke, C M.]]
+
[[Category: Teschke CM]]
-
[[Category: Tu, L H.]]
+
[[Category: Tu LH]]
-
[[Category: Hk97-like fold]]
+
-
[[Category: Virus]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 31 13:35:05 2010''
+

Current revision

P22 expanded head coat protein structures reveal a novel mechanism for capsid maturation: Stability without auxiliary proteins or chemical cross-links

3iyi, resolution 9.10Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools