3m2t

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:58, 17 October 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3m2t.jpg|left|200px]]
 
-
<!--
+
==The crystal structure of dehydrogenase from Chromobacterium violaceum==
-
The line below this paragraph, containing "STRUCTURE_3m2t", creates the "Structure Box" on the page.
+
<StructureSection load='3m2t' size='340' side='right'caption='[[3m2t]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M2T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3M2T FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3m2t| PDB=3m2t | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3m2t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m2t OCA], [https://pdbe.org/3m2t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3m2t RCSB], [https://www.ebi.ac.uk/pdbsum/3m2t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3m2t ProSAT]</span></td></tr>
-
 
+
</table>
-
===The crystal structure of dehydrogenase from Chromobacterium violaceum===
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
3M2T is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M2T OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m2/3m2t_consurf.spt"</scriptWhenChecked>
-
[[Category: Chromobacterium violaceum]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Burley, S K.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
</jmolCheckbox>
-
[[Category: Swaminathan, S.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3m2t ConSurf].
-
[[Category: Zhang, Z.]]
+
<div style="clear:both"></div>
-
[[Category: New york sgx research center for structural genomic]]
+
__TOC__
-
[[Category: Nysgxrc]]
+
</StructureSection>
-
[[Category: Oxidoreductase]]
+
[[Category: Large Structures]]
-
[[Category: Protein structure initiative]]
+
[[Category: Burley SK]]
-
[[Category: Psi]]
+
[[Category: Swaminathan S]]
-
[[Category: Sgxny]]
+
[[Category: Zhang Z]]
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 7 10:53:16 2010''
+

Current revision

The crystal structure of dehydrogenase from Chromobacterium violaceum

PDB ID 3m2t

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3m2t"
Personal tools