1fau

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{{Theoretical_model}}
{{Theoretical_model}}
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{{Seed}}
 
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[[Image:1fau.png|left|200px]]
 
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==BUILDING BY HOMOLOGY OF HUMAN TISSUE TRANSGLUTAMINASE==
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The line below this paragraph, containing "STRUCTURE_1fau", creates the "Structure Box" on the page.
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<StructureSection load='1fau' size='340' side='right'caption='[[1fau]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FAU FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1fau FirstGlance], [https://www.ebi.ac.uk/pdbsum/1fau PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1fau ProSAT]</span></td></tr>
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</table>
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{{STRUCTURE_1fau| PDB=1fau | SCENE= }}
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The role of calcium ions in the regulation of tissue transglutaminase is investigated by experimental approaches and computer modeling. A three-dimensional model of the transglutaminase is computed by homology building on crystallized human factor XIII and is used to interpret structural and functional results. The molecule is a prolate ellipsoid (6.2 x 4.2 x 11 nm) and comprises four domains, assembled pairwise into N-terminal and C-terminal regions. The active site is hidden in a cleft between these regions and is inaccessible to macromolecular substrates in the calcium-free form. Protein dynamics simulation indicates that these regions move apart upon addition of calcium ions, revealing the active site for catalysis. The protein dimensions are consistent with results obtained with small-angle neutron and X-ray scattering. The gyration radius of the protein (3 nm) increases in the presence of calcium ions (3.9 nm), but it is virtually unaffected in the presence of GTP, suggesting that only calcium ions can promote major structural changes in the native protein. Proteolysis of an exposed loop connecting the N-terminal and C-terminal regions is linearly correlated with enzyme inactivation and prevents the calcium-induced conformational changes.
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===BUILDING BY HOMOLOGY OF HUMAN TISSUE TRANSGLUTAMINASE===
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The structural basis for the regulation of tissue transglutaminase by calcium ions.,Casadio R, Polverini E, Mariani P, Spinozzi F, Carsughi F, Fontana A, Polverino de Laureto P, Matteucci G, Bergamini CM Eur J Biochem. 1999 Jun;262(3):672-9. PMID:10411627<ref>PMID:10411627</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_10411627}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1fau" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 10411627 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_10411627}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Theoretical Model]]
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Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FAU OCA].
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[[Category: Large Structures]]
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==Reference==
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<ref group="xtra">PMID:10411627</ref><references group="xtra"/>
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[[Category: Bergamini, C M]]
[[Category: Bergamini, C M]]
[[Category: Carsughi, F]]
[[Category: Carsughi, F]]
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[[Category: Polverino De Laureto, P]]
[[Category: Polverino De Laureto, P]]
[[Category: Spinozzi, F]]
[[Category: Spinozzi, F]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 8 07:14:28 2010''
 

Current revision

Theoretical Model: The protein structure described on this page was determined theoretically, and hence should be interpreted with caution.

BUILDING BY HOMOLOGY OF HUMAN TISSUE TRANSGLUTAMINASE

PDB ID 1fau

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