1txh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:33, 29 September 2021) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
{{Theoretical_model}}
{{Theoretical_model}}
-
{{Seed}}
 
-
[[Image:1txh.png|left|200px]]
 
-
<!--
+
==A THEORETICAL C-ALPHA MODEL OF THE TRANSMEMBRANE ALPHA- HELICES IN GAP JUNCTION INTERCELLULAR CHANNELS==
-
The line below this paragraph, containing "STRUCTURE_1txh", creates the "Structure Box" on the page.
+
<StructureSection load='1txh' size='340' side='right'caption='[[1txh]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TXH FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1txh FirstGlance], [https://www.ebi.ac.uk/pdbsum/1txh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1txh ProSAT]</span></td></tr>
-
-->
+
</table>
-
{{STRUCTURE_1txh| PDB=1txh | SCENE= }}
+
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Gap junction channels connect the cytoplasms of apposed cells via an intercellular conduit formed by the end-to-end docking of two hexameric hemichannels called connexons. We used electron cryomicroscopy to derive a three-dimensional density map at 5.7 angstroms in-plane and 19.8 angstroms vertical resolution, allowing us to identify the positions and tilt angles for the 24 alpha helices within each hemichannel. The four hydrophobic segments in connexin sequences were assigned to the alpha helices in the map based on biochemical and phylogenetic data. Analyses of evolutionary conservation and compensatory mutations in connexin evolution identified the packing interfaces between the helices. The final model, which specifies the coordinates of Calpha atoms in the transmembrane domain, provides a structural basis for understanding the different physiological effects of almost 30 mutations and polymorphisms in terms of structural deformations at the interfaces between helices, revealing an intimate connection between molecular structure and disease.
-
===A THEORETICAL C-ALPHA MODEL OF THE TRANSMEMBRANE ALPHA- HELICES IN GAP JUNCTION INTERCELLULAR CHANNELS===
+
A Calpha model for the transmembrane alpha helices of gap junction intercellular channels.,Fleishman SJ, Unger VM, Yeager M, Ben-Tal N Mol Cell. 2004 Sep 24;15(6):879-88. PMID:15383278<ref>PMID:15383278</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<!--
+
</div>
-
The line below this paragraph, {{ABSTRACT_PUBMED_15383278}}, adds the Publication Abstract to the page
+
<div class="pdbe-citations 1txh" style="background-color:#fffaf0;"></div>
-
(as it appears on PubMed at http://www.pubmed.gov), where 15383278 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_15383278}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
[[Category: Theoretical Model]]
-
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TXH OCA].
+
[[Category: Large Structures]]
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:15383278</ref><references group="xtra"/>
+
[[Category: Ben-Tal, N]]
[[Category: Ben-Tal, N]]
[[Category: Fleishman, S J]]
[[Category: Fleishman, S J]]
[[Category: Unger, V M]]
[[Category: Unger, V M]]
[[Category: Yeager, M]]
[[Category: Yeager, M]]
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 8 08:07:42 2010''
 

Current revision

Theoretical Model: The protein structure described on this page was determined theoretically, and hence should be interpreted with caution.

A THEORETICAL C-ALPHA MODEL OF THE TRANSMEMBRANE ALPHA- HELICES IN GAP JUNCTION INTERCELLULAR CHANNELS

PDB ID 1txh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools