1ij4
From Proteopedia
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{{Theoretical_model}} | {{Theoretical_model}} | ||
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- | [[Image:1ij4.png|left|200px]] | ||
- | + | ==MODEL OF THE ALB2 I-DOMAIN / ICAM-1 D1 COMPLEX== | |
- | + | <StructureSection load='1ij4' size='340' side='right'caption='[[1ij4]]' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IJ4 FirstGlance]. <br> | |
- | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ij4 FirstGlance], [https://www.ebi.ac.uk/pdbsum/1ij4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ij4 ProSAT]</span></td></tr> | |
- | -- | + | </table> |
- | + | <div style="background-color:#fffaf0;"> | |
+ | == Publication Abstract from PubMed == | ||
+ | The interaction of the alphaLbeta2 integrin with its cellular ligand the intercellular adhesion molecule-1 (ICAM-1) is critical for the tight binding interaction between most leukocytes and the vascular endothelium before transendothelial migration to the sites of inflammation. In this article we have modeled the alphaL subunit I-domain in its active form, which was computationally docked with the D1 domain of the ICAM-1 to probe potential protein-protein interactions. The experimentally observed key interaction between the carboxylate of Glu 34 in the ICAM-1 D1 domain and the metal ion-dependent adhesion site (MIDAS) in the open alphaL I-domain was consistently reproduced by our calculations. The calculations reveal the nature of the alphaLbeta2/ICAM-1 interaction and suggest an explanation for the increased ligand-binding affinity in the "open" versus the "closed" conformation of the alphaL I-domain. A mechanism for substrate selectivity among alphaL, alphaM, and alpha2 I-domains is suggested whereby the orientation of the loops within the I-domain is critical in mediating the interaction of the Glu 34 carboxylate of ICAM-1 D1 with the MIDAS. | ||
- | + | Model of the alphaLbeta2 integrin I-domain/ICAM-1 DI interface suggests that subtle changes in loop orientation determine ligand specificity.,Legge GB, Morris GM, Sanner MF, Takada Y, Olson AJ, Grynszpan F Proteins. 2002 Aug 1;48(2):151-60. PMID:12112684<ref>PMID:12112684</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | <div class="pdbe-citations 1ij4" style="background-color:#fffaf0;"></div> | |
- | + | == References == | |
- | + | <references/> | |
- | + | __TOC__ | |
- | + | </StructureSection> | |
- | == | + | [[Category: Theoretical Model]] |
- | + | [[Category: Large Structures]] | |
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- | == | + | |
- | < | + | |
[[Category: Grynszpan, F]] | [[Category: Grynszpan, F]] | ||
[[Category: Legge, G B]] | [[Category: Legge, G B]] | ||
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[[Category: Sanner, M F]] | [[Category: Sanner, M F]] | ||
[[Category: Takada, Y]] | [[Category: Takada, Y]] | ||
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- | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 8 08:19:06 2010'' |
Current revision
Theoretical Model: The protein structure described on this page was determined theoretically, and hence should be interpreted with caution. |
MODEL OF THE ALB2 I-DOMAIN / ICAM-1 D1 COMPLEX
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